RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SH3BP2P78314 561 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 NAA25Q14CX7 972 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 TBR1Q16650 682 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
USB1-211ENST00000565662 TMEM126BQ8IUX1 230 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 LMNTD2Q8IXW0 634 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 SLC22A15Q8IZD6 547 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 OR4E2Q8NGC2 313 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 MAGEC3Q8TD91 643 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 DENND1AQ8TEH3 1009 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 EXTL1Q92935 676 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 HGH1Q9BTY7 390 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 LHX9Q9NQ69 397 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 PIH1D1Q9NWS0 290 aaKnown RBP16.25■□□□□ 0.19
USB1-211ENST00000565662 SERTAD3Q9UJW9 196 aa16.25■□□□□ 0.19
USB1-211ENST00000565662 LOC101059948A0A1B0GTJ6 334 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 CD3EAPO15446 510 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 NDUFS3O75489 264 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 SCRG1O75711 98 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 C1QL1O75973 258 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 PRDX3P30048 256 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 FNTAP49354 379 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 KPNA2P52292 529 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 SESN2P58004 480 aaPredicted RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 RPS15P62841 145 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 KIR2DS3Q14952 304 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 TIPARPQ7Z3E1 657 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 DCUN1D3Q8IWE4 304 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 GPR135Q8IZ08 494 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 LILRA3Q8N6C8 439 aaPredicted RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 GALNT6Q8NCL4 622 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 APOBEC4Q8WW27 367 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 N4BP2L2Q92802 583 aaPredicted RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 FOPNLQ96NB1 174 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 KIFC1Q9BW19 673 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 SLC25A18Q9H1K4 315 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 TREX1Q9NSU2 369 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 INTS7Q9NVH2 962 aaKnown RBP16.24■□□□□ 0.19
USB1-211ENST00000565662 SOX13Q9UN79 622 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 POLHQ9Y253 713 aa16.24■□□□□ 0.19
USB1-211ENST00000565662 EBLN1P0CF75 366 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 FOLR1P15328 257 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 OGNP20774 298 aaKnown RBP16.23■□□□□ 0.19
USB1-211ENST00000565662 ACADLP28330 430 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 PDHA2P29803 388 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 ATP5DP30049 168 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 CCNFP41002 786 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 PREPP48147 710 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 RAB28P51157 221 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 DNASE1L3Q13609 305 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 LY6DQ14210 128 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 CYP1B1Q16678 543 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 PLEKHS1Q5SXH7 462 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 PTRHD1Q6GMV3 140 aaKnown RBP16.23■□□□□ 0.19
USB1-211ENST00000565662 KIAA0930Q6ICG6 404 aaPredicted RBP16.23■□□□□ 0.19
USB1-211ENST00000565662 SPESP1Q6UW49 350 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 OTUD6BQ8N6M0 293 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 PRELID2Q8N945 189 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 ACTRT1Q8TDG2 376 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 THAP4Q8WY91 577 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 MAGOHBQ96A72 148 aaKnown RBP16.23■□□□□ 0.19
USB1-211ENST00000565662 ZNF501Q96CX3 271 aaPredicted RBP16.23■□□□□ 0.19
USB1-211ENST00000565662 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 RUNDC3BQ96NL0 473 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 SLC7A5P2Q9GIP4 190 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 STARD5Q9NSY2 213 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 ACTR10Q9NZ32 417 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 CROTQ9UKG9 612 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 AP1M2Q9Y6Q5 423 aa16.23■□□□□ 0.19
USB1-211ENST00000565662 OR51F1A6NGY5 319 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 BTN3A1O00481 513 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 ESR1P03372 595 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 ETS1P14921 441 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 CYP2A7P20853 494 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 POLE2P56282 527 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 KCNAB2Q13303 367 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 SLC5A12Q1EHB4 618 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 LINC00303Q3SY05 128 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 PWWP2BQ6NUJ5 590 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 OTOAQ7RTW8 1153 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 SYVN1Q86TM6 617 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 MCUQ8NE86 351 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 CALML6Q8TD86 181 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 CHRAC1Q9NRG0 131 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
USB1-211ENST00000565662 SLC2A6Q9UGQ3 507 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 SRPK3Q9UPE1 567 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 PADI2Q9Y2J8 665 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 ATMQ13315 3056 aa16.22■□□□□ 0.19
USB1-211ENST00000565662 FASNP49327 2511 aaKnown RBP16.21■□□□□ 0.19
USB1-211ENST00000565662 A0A0J9YY10 115 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 E7EQ34 232 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 GPC4O75487 556 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 SLCO2B1O94956 709 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 S1PR4O95977 384 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 KRT14P02533 472 aa16.21■□□□□ 0.19
USB1-211ENST00000565662 PRB1P04280 392 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms