RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 GOLGA8TH3BQL2 631 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 KDM1AO60341 852 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 ZBTB11O95625 1053 aaPredicted RBP17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 ARNTP27540 789 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 EIF3BP55884 814 aaKnown RBP17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 ACY1Q03154 408 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 DHX34Q14147 1143 aaKnown RBP17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 TMTC4Q5T4D3 741 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 KIAA0930Q6ICG6 404 aaPredicted RBP17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 PCGF5Q86SE9 256 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 NAT8LQ8N9F0 302 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 OR5K2Q8NHB8 316 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 TCF12Q99081 682 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 P2RY12Q9H244 342 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 XKR8Q9H6D3 395 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 RARRES3Q9UL19 164 aa17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 SMG1Q96Q15 3661 aaKnown RBP17.82■□□□□ 0.44
SYNGR3-204ENST00000564642 HELZ2Q9BYK8 2649 aaKnown RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 C2orf74A8MZ97 194 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 ERVH48-1M5A8F1 160 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 BTN3A3O00478 584 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 BTN3A1O00481 513 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 KPNA5O15131 536 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 FGF5P12034 268 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 FOLR1P15328 257 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 RPS3P23396 243 aaKnown RBP eCLIP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 AOAHP28039 575 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 SHMT2P34897 504 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 TUBB3Q13509 450 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 KCNAB1Q14722 419 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 ANKRD20A4Q4UJ75 823 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 TAF1BQ53T94 588 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 RNF187Q5TA31 235 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 KIAA1614Q5VZ46 1190 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 BPHLQ86WA6 291 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 SLC22A15Q8IZD6 547 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 D2HGDHQ8N465 521 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 LKAAEAR1Q8TD35 194 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 KIAA1143Q96AT1 154 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 ZNF669Q96BR6 464 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 BBC3Q96PG8 261 aaPredicted RBP17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 C1GALT1Q9NS00 363 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 SOHLH2Q9NX45 425 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 PCYOX1Q9UHG3 505 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 POMT2Q9UKY4 750 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 MAD1L1Q9Y6D9 718 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 RPS6KL1Q9Y6S9 549 aa17.81■□□□□ 0.44
SYNGR3-204ENST00000564642 ATXN7O15265 892 aaPredicted RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 MAP3K7O43318 606 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 GPC4O75487 556 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 SPAG6O75602 509 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 KIAA0754O94854 1291 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 RPN2P04844 631 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 EBLN1P0CF75 366 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 LIFP15018 202 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 OGNP20774 298 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 PRDX3P30048 256 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 FMO4P31512 558 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 ABHD18Q0P651 414 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 ABRQ12979 859 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 THOC5Q13769 683 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 PTK6Q13882 451 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 MAP7Q14244 749 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 RNASEH2BQ5TBB1 312 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 NEPROQ6NW34 567 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 FBXO38Q6PIJ6 1188 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 C6orf15Q6UXA7 325 aaPredicted RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 OTOAQ7RTW8 1153 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 TIPARPQ7Z3E1 657 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 HOOK3Q86VS8 718 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 CREG2Q8IUH2 290 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 KLHL7Q8IXQ5 586 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 ESX1Q8N693 406 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 CFAP61Q8NHU2 1237 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 SLCO2A1Q92959 643 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 RUNDC3BQ96NL0 473 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 NRTNQ99748 197 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 TRIM56Q9BRZ2 755 aaKnown RBP17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 EFHD1Q9BUP0 239 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 FGF21Q9NSA1 209 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 ACTR10Q9NZ32 417 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 ICKQ9UPZ9 632 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 VPS9D1Q9Y2B5 631 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 PCDHGA4Q9Y5G9 962 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 AHCTF1Q8WYP5 2266 aa17.8■□□□□ 0.44
SYNGR3-204ENST00000564642 PIPSLA2A3N6 862 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 SLC9B1P1A6NJY1 282 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 H3BMM5 538 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 DNALI1O14645 258 aaPredicted RBP17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 SLCO2B1O94956 709 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 DLGAP3O95886 979 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 ZNF28P17035 718 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 TYSND1Q2T9J0 566 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 UNC5AQ6ZN44 842 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 TMEM135Q86UB9 458 aa17.79■□□□□ 0.44
SYNGR3-204ENST00000564642 CILP2Q8IUL8 1156 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms