RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 BTN3A3O00478 584 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 LIASO43766 372 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 CYP2A7P20853 494 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ADRA1DP25100 572 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ACADLP28330 430 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 FOXN2P32314 431 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ARCN1P48444 511 aaKnown RBP14.54□□□□□ -0.08
SPG7-210ENST00000564409 LMAN1P49257 510 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ITGA1P56199 1179 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 FOXK1P85037 733 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 PLEKHS1Q5SXH7 462 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 FAM199XQ6PEV8 388 aaPredicted RBP14.54□□□□□ -0.08
SPG7-210ENST00000564409 AFTPHQ6ULP2 937 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 SPESP1Q6UW49 350 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 PPP1R21Q6ZMI0 780 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ASB18Q6ZVZ8 466 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ADGRF3Q8IZF5 1079 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 TEX19Q8NA77 164 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 PHC3Q8NDX5 983 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ELMO1Q92556 727 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 CLIP3Q96DZ5 547 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 TCTN2Q96GX1 697 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 TRAPPC9Q96Q05 1148 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 C17orf62Q9BQA9 187 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 HGH1Q9BTY7 390 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ACTR5Q9H9F9 607 aaPredicted RBP14.54□□□□□ -0.08
SPG7-210ENST00000564409 ACTR10Q9NZ32 417 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 TLK1Q9UKI8 766 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ZNF148Q9UQR1 794 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 ASF1AQ9Y294 204 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 PCDHGB7Q9Y5F8 929 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 PCDHGA9Q9Y5G4 932 aaKnown RBP14.54□□□□□ -0.08
SPG7-210ENST00000564409 CAPN6Q9Y6Q1 641 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 MED13Q9UHV7 2174 aa14.54□□□□□ -0.08
SPG7-210ENST00000564409 UBR5O95071 2799 aaPredicted RBP14.53□□□□□ -0.08
SPG7-210ENST00000564409 CCDC162PA2VCL2 907 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 TMEM150CB9EJG8 249 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 AP3B1O00203 1094 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 RPN2P04844 631 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 CD63P08962 238 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 ST6GAL1P15907 406 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 RORAP35398 523 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 ACVR1Q04771 509 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 SYTL3Q4VX76 610 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 AARS2Q5JTZ9 985 aaKnown RBP14.53□□□□□ -0.08
SPG7-210ENST00000564409 TSTD2Q5T7W7 516 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 SLC13A5Q86YT5 568 aaPredicted RBP14.53□□□□□ -0.08
SPG7-210ENST00000564409 GPR135Q8IZ08 494 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 CCDC89Q8N998 374 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 SLC38A9Q8NBW4 561 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 OR52K1Q8NGK4 314 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 OR13J1Q8NGT2 312 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 OR5K2Q8NHB8 316 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 ATG4AQ8WYN0 398 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 RNF31Q96EP0 1072 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 PPM1MQ96MI6 270 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 DHRS4Q9BTZ2 278 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 SLC7A5P2Q9GIP4 190 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 CHST8Q9H2A9 424 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 AKIRIN1Q9H9L7 192 aaPredicted RBP14.53□□□□□ -0.08
SPG7-210ENST00000564409 ETNK1Q9HBU6 452 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 PAK5Q9P286 719 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 AP1M2Q9Y6Q5 423 aa14.53□□□□□ -0.08
SPG7-210ENST00000564409 SLC5A10A0PJK1 596 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 E7EQ34 232 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 SNRNP200O75643 2136 aaKnown RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 IFNB1P01574 187 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 PRSS56P0CW18 603 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 AGXTP21549 392 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ABRQ12979 859 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 PRKG2Q13237 762 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 DNAJC21Q5F1R6 531 aaKnown RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 ZNF789Q5FWF6 425 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 DRICH1Q6PGQ1 229 aaPredicted RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 FBXO38Q6PIJ6 1188 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 TMEM135Q86UB9 458 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 GAS2L3Q86XJ1 694 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 HPS6Q86YV9 775 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 OR5AR1Q8NGP9 310 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 OR4L1Q8NH43 312 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 OR1L3Q8NH93 324 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ASZ1Q8WWH4 475 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 N4BP2L2Q92802 583 aaPredicted RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 HDAC10Q969S8 669 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 IP6K3Q96PC2 410 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 CASS4Q9NQ75 786 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ACSS2Q9NR19 701 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 PIH1D1Q9NWS0 290 aaKnown RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 TCFL5Q9UL49 500 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 G3BP2Q9UN86 482 aaKnown RBP14.52□□□□□ -0.09
SPG7-210ENST00000564409 SNX7Q9UNH6 387 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ICKQ9UPZ9 632 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ZKSCAN5Q9Y2L8 839 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 ANKRD12Q6UB98 2062 aa14.52□□□□□ -0.09
SPG7-210ENST00000564409 CCDC78A2IDD5 438 aa14.51□□□□□ -0.09
SPG7-210ENST00000564409 C9J4A7 227 aa14.51□□□□□ -0.09
SPG7-210ENST00000564409 CHRM5P08912 532 aaPredicted RBP14.51□□□□□ -0.09
SPG7-210ENST00000564409 PGDP52209 483 aa14.51□□□□□ -0.09
SPG7-210ENST00000564409 PRAMEP78395 509 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms