RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 NEBLO76041 1014 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 LUC7L3O95232 432 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 APOEP02649 317 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 TUBB4AP04350 444 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 GRPP07492 148 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 NPSP0C0P6 89 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SFTPCP11686 197 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SYT1P21579 422 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 MAN1A1P33908 653 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 DRD3P35462 400 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 RGS7P49802 495 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 METAP1P53582 386 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 HNRNPKP61978 463 aaKnown RBP eCLIP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 YWHAEP62258 255 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SULT2A1Q06520 285 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CCDC15Q0P6D6 951 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CNTN1Q12860 1018 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 STK4Q13043 487 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 ZNF177Q13360 481 aaPredicted RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 ARL13BQ3SXY8 428 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 DCAF6Q58WW2 860 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 FAM133BQ5BKY9 247 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 ARHGAP17Q68EM7 881 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CRTC1Q6UUV9 634 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 RBM44Q6ZP01 1051 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 INTS8Q75QN2 995 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 EFL1Q7Z2Z2 1120 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 PTAR1Q7Z6K3 402 aaPredicted RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 ZBTB46Q86UZ6 589 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 TRIM69Q86WT6 500 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CHSY1Q86X52 802 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 GRAMD1CQ8IYS0 662 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 EXD3Q8N9H8 876 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 LINC00301Q8NCQ3 95 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 MYRIPQ8NFW9 859 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 WDR36Q8NI36 951 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CCDC47Q96A33 483 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 GRAMD1AQ96CP6 724 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 C5orf34Q96MH7 638 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 PRICKLE1Q96MT3 831 aaPredicted RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 ZNF396Q96N95 335 aaPredicted RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SPAG5Q96R06 1193 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 MIS12Q9H081 205 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 USP29Q9HBJ7 922 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 TMEM8AQ9HCN3 771 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 PREBQ9HCU5 417 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 FZD3Q9NPG1 666 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 CNGB3Q9NQW8 809 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SLC25A13Q9UJS0 675 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 TSPAN16Q9UKR8 245 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 SH2B3Q9UQQ2 575 aa6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 NYNRINQ9P2P1 1898 aaKnown RBP6.06□□□□□ -1.44
AP000842.3-201ENST00000564354 A6NNZ2 444 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 KPNA3O00505 521 aaPredicted RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 STX10O60499 249 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PPP6R2O75170 966 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 IGLV3-27P01718 113 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 SETSIPP0DME0 302 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 VDRP11473 427 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PDGFRAP16234 1089 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 TGM2P21980 687 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 HNRNPA2B1P22626 353 aaKnown RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 NR2F2P24468 414 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PSMC2P35998 433 aaKnown RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 ARHGAP25P42331 645 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 MMP13P45452 471 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 ME1P48163 572 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 CLDN2P57739 230 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 DAOAP59103 153 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 SLC12A1Q13621 1099 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 DEFB133Q30KQ1 61 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 MS4A13Q5J8X5 152 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 C1orf220Q5T0J3 134 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 RAP1GAP2Q684P5 730 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 KRT39Q6A163 491 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 NADSYN1Q6IA69 706 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 OR6B2Q6IFH4 312 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 MSANTD2Q6P1R3 559 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 GUSBP11Q6P575 273 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 SHC4Q6S5L8 630 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 Q6ZSR6 202 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 FBXL13Q8NEE6 735 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 LMX1AQ8TE12 382 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 JPH3Q8WXH2 748 aaPredicted RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 AZIN2Q96A70 460 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 MTFMTQ96DP5 389 aaKnown RBP6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 SGF29Q96ES7 293 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 MVB12AQ96EY5 273 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 LMLNQ96KR4 655 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 CCDC114Q96M63 670 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 SERPINB11Q96P15 392 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 IL12RB2Q99665 862 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 PPCSQ9HAB8 311 aa6.05□□□□□ -1.44
AP000842.3-201ENST00000564354 TCF7L1Q9HCS4 588 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms