RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KCNK6Q9Y257 313 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 ST14Q9Y5Y6 855 aa12.62□□□□□ -0.39
SPG7-209ENST00000564047 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 GFYI3L273 518 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 CDC7O00311 574 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 SCAMP1O15126 338 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 KERAO60938 352 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 EPN2O95208 641 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 C8GP07360 202 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 ENO2P09104 434 aaPredicted RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 SLC35G4P0C7Q5 338 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 CTSEP14091 401 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 CHN1P15882 459 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 ACADLP28330 430 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 CORO7P57737 925 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 HNRNPKP61978 463 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPG7-209ENST00000564047 SHC2P98077 582 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 SP140Q13342 867 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 OR4D1Q15615 310 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 TSNQ15631 228 aaKnown RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 KIF19Q2TAC6 998 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 CAPRIN2Q6IMN6 1127 aaKnown RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 WASH2PQ6VEQ5 465 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 ADAMTSL2Q86TH1 951 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 NRROSQ86YC3 692 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 ANKRD42Q8N9B4 389 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 RDH11Q8TC12 318 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 SKA2Q8WVK7 121 aaPredicted RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 ASB11Q8WXH4 323 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 FOPNLQ96NB1 174 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 ATOH8Q96SQ7 321 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 TCEAL2Q9H3H9 227 aaPredicted RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 OSGEPL1Q9H4B0 414 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 WASH6PQ9NQA3 447 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 XPR1Q9UBH6 696 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
SPG7-209ENST00000564047 PCOLCE2Q9UKZ9 415 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 NBEAQ8NFP9 2946 aa12.61□□□□□ -0.39
SPG7-209ENST00000564047 DSPP15924 2871 aaKnown RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 SDK1Q7Z5N4 2213 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SYCE1LA8MT33 242 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 IFRD1O00458 451 aaPredicted RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 PSIP1O75475 530 aaKnown RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 PROS1P07225 676 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SBK3P0C264 359 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 DHRS4L1P0CG22 281 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 AK4P27144 223 aaPredicted RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 ACTR1BP42025 376 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ACTR1AP61163 376 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 BNC1Q01954 994 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ABRQ12979 859 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ELOCQ15369 112 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 CSRP2Q16527 193 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 UAP1L1Q3KQV9 507 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SBSNQ6UWP8 590 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ABRAXAS1Q6UWZ7 409 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 UNC5DQ6UXZ4 953 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 UBE2R2Q712K3 238 aaPredicted RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 SDR16C5Q8N3Y7 309 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ARMC2Q8NEN0 867 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 CCL4L1Q8NHW4 92 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 MDM1Q8TC05 714 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 CHMP6Q96FZ7 201 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 LRRC61Q9BV99 259 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SLC12A9Q9BXP2 914 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ZDHHC5Q9C0B5 715 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 WWP1Q9H0M0 922 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 RDH14Q9HBH5 336 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 INTS9Q9NV88 658 aaKnown RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
SPG7-209ENST00000564047 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ADAMTS6Q9UKP5 1117 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 RNF112Q9ULX5 631 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SLC6A14Q9UN76 642 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 OARD1Q9Y530 152 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
SPG7-209ENST00000564047 ABCA7Q8IZY2 2146 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 IGF2RP11717 2491 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 A6NCN8 305 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 PDZK1P1A8MUH7 402 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 G3V2L1 256 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 TK2O00142 265 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 MYO1CO00159 1063 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 CATP04040 527 aaKnown RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 CPA3P15088 417 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 TAC1P20366 129 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 CYP2A7P20853 494 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 DRD4P21917 467 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 HALP42357 657 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 RXRGP48443 463 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 KCNC1P48547 511 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 SEC24CP53992 1094 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 WDR4P57081 412 aaKnown RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 IRX4P78413 519 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms