RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 FFAR2O15552 330 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 EDF1O60869 148 aaKnown RBP18.88■□□□□ 0.61
SPSB3-204ENST00000563741 SDHBP21912 280 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 DRD4P21917 467 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 RPA4Q13156 261 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 STX3Q13277 289 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 WDR45BQ5MNZ6 344 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 PEAR1Q5VY43 1037 aaPredicted RBP18.88■□□□□ 0.61
SPSB3-204ENST00000563741 METRNLQ641Q3 311 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 ATG14Q6ZNE5 492 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 UBE2R2Q712K3 238 aaPredicted RBP18.88■□□□□ 0.61
SPSB3-204ENST00000563741 RABEPKQ7Z6M1 372 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 PDPRQ8NCN5 879 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 L3HYPDHQ96EM0 354 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 OR2M4Q96R27 311 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 RDH14Q9HBH5 336 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 AASDHPPTQ9NRN7 309 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 KLC4Q9NSK0 619 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 CD274Q9NZQ7 290 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 PDE10AQ9Y233 779 aa18.88■□□□□ 0.61
SPSB3-204ENST00000563741 SCAMP1O15126 338 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 SLC16A5O15375 505 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ITM2AO43736 263 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 RRP9O43818 475 aaKnown RBP18.87■□□□□ 0.61
SPSB3-204ENST00000563741 PSIP1O75475 530 aaKnown RBP18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ENO2P09104 434 aaPredicted RBP18.87■□□□□ 0.61
SPSB3-204ENST00000563741 THEGLP0DJG4 465 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 VCLP18206 1134 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 HERVK_113P63132 956 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ASPHQ12797 758 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ABRQ12979 859 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ALG11Q2TAA5 492 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 TCEAL6Q6IPX3 200 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 RGL4Q8IZJ4 473 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 CEP76Q8TAP6 659 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 TCEAL3Q969E4 200 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 TSACCQ96A04 125 aaPredicted RBP18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ERVK-6Q9BXR3 956 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 PARVBQ9HBI1 364 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 THAP1Q9NVV9 213 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 KCNK6Q9Y257 313 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 PLEKHM1Q9Y4G2 1056 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 GPSM3Q9Y4H4 160 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
SPSB3-204ENST00000563741 ARHGEF33A8MVX0 844 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 LYPLA1O75608 230 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SIX3O95343 332 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 MAOBP27338 520 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 ALDH18A1P54886 795 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SRP54P61011 504 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 GABPB1Q06547 395 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 TERF2Q15554 542 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 DUOXA1Q1HG43 343 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 RSPO4Q2I0M5 234 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 ZNF678Q5SXM1 525 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 MBOAT1Q6ZNC8 495 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 PDZD3Q86UT5 571 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CCNYL1Q8N7R7 359 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SPDYE1Q8NFV5 336 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 FAM174AQ8TBP5 190 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 NETO1Q8TDF5 533 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 C7orf26Q96N11 449 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 PITPNM3Q9BZ71 974 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 TMCO1Q9UM00 188 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CEP250Q9BV73 2442 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SPTY2D1-AS1A0A0U1RR47 76 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 LRRC14BA6NHZ5 514 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 PATE3B3GLJ2 98 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 TMEM114B3SHH9 223 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 STX16-NPEPL1H3BU86 382 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 STX16O14662 325 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SNX2O60749 519 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 GUCA1CO95843 209 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 FAM107AO95990 144 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 IMPDH1P20839 514 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 ACADLP28330 430 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 MAPK9P45984 424 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CCR10P46092 362 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SLC1A6P48664 564 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 AGTR2P50052 363 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 ABCE1P61221 599 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 RCN2Q14257 317 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 PTK2BQ14289 1009 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SETDB1Q15047 1291 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 TRIM61Q5EBN2 209 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 FBXO48Q5FWF7 155 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 LAYNQ6UX15 382 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CFAP61Q8NHU2 1237 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 C1orf216Q8TAB5 229 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 DNASE2BQ8WZ79 361 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CCT8L2Q96SF2 557 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SORT1Q99523 831 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 OSGEPL1Q9H4B0 414 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SUSD2Q9UGT4 822 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 CDV3Q9UKY7 258 aaKnown RBP18.86■□□□□ 0.61
SPSB3-204ENST00000563741 SPTBN4Q9H254 2564 aa18.86■□□□□ 0.61
SPSB3-204ENST00000563741 KNL1Q8NG31 2342 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms