RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PTP4A2Q12974 167 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 BECN1Q14457 450 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 ATP13A5Q4VNC0 1218 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SLC9B1Q4ZJI4 515 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 PRPF39Q86UA1 669 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 TDRPQ86YL5 185 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 DHX40Q8IX18 779 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 FBXO16Q8IX29 292 aaPredicted RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 KLHDC9Q8NEP7 349 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 ZNF274Q96GC6 653 aaPredicted RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SCMH1Q96GD3 660 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 LMLNQ96KR4 655 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 TAAR1Q96RJ0 339 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 IWS1Q96ST2 819 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 ITPAQ9BY32 194 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 C11orf49Q9H6J7 331 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 C17orf75Q9HAS0 396 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SLC9A2Q9UBY0 812 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 GIMAP2Q9UG22 337 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SEC63Q9UGP8 760 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 RCOR1Q9UKL0 485 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 ZHX1Q9UKY1 873 aaPredicted RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 Q9Y3F1 56 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 LYVE1Q9Y5Y7 322 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 DDX49Q9Y6V7 483 aaKnown RBP4.83□□□□□ -1.64
LINC00254-201ENST00000563416 TCHHQ07283 1943 aa4.83□□□□□ -1.64
LINC00254-201ENST00000563416 STK36Q9NRP7 1315 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 KIAA1671Q9BY89 1806 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 hCG_1807616A0A1W2PRN6 198 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 ESYT2A0FGR8 921 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 LRRC53A6NM62 1247 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 KBTBD13C9JR72 458 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 USP17L23D6RBM5 183 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 LDB3O75112 727 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 PGK1P00558 417 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 POLR2MP0CAP2 368 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 CSH1P0DML2 217 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 CSH2P0DML3 217 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 GLULP15104 373 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 IFNAR1P17181 557 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 IL11P20809 199 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 HOXA13P31271 388 aaPredicted RBP4.82□□□□□ -1.64
LINC00254-201ENST00000563416 BSGP35613 385 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 NLRP5P59047 1200 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 ERVFC1-1P60608 527 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 MC1RQ01726 317 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 CREB5Q02930 508 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 EPS8Q12929 822 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 CDC16Q13042 620 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 GSTA3Q16772 222 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 MMEL1Q495T6 779 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 DUSP28Q4G0W2 176 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 LCTLQ6UWM7 567 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 SLC46A3Q7Z3Q1 461 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 TLK2Q86UE8 772 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 NR2C2APQ86WQ0 139 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 SLC35F3Q8IY50 421 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 TTC30BQ8N4P2 665 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 SCFD2Q8WU76 684 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 PIBF1Q8WXW3 757 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 FAM120BQ96EK7 910 aaKnown RBP4.82□□□□□ -1.64
LINC00254-201ENST00000563416 RADILQ96JH8 1075 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 SLITRK1Q96PX8 696 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 LBHD1Q9BQE6 289 aaPredicted RBP4.82□□□□□ -1.64
LINC00254-201ENST00000563416 GAREM1Q9H706 876 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 ZNF556Q9HAH1 456 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 BRF2Q9HAW0 419 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 PDRG1Q9NUG6 133 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 BARHL2Q9NY43 387 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 ICAM5Q9UMF0 924 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 CAMK2AQ9UQM7 478 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 LSM4Q9Y4Z0 139 aaKnown RBP4.82□□□□□ -1.64
LINC00254-201ENST00000563416 STON1Q9Y6Q2 735 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 PIAS3Q9Y6X2 628 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 ATG2AQ2TAZ0 1938 aa4.82□□□□□ -1.64
LINC00254-201ENST00000563416 RALGAPA2Q2PPJ7 1873 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 BICDL2A1A5D9 508 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 AGAP14A8MT82 685 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 CLGNO14967 610 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 SEC14L5O43304 696 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 PFKFB2O60825 505 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 NDUFS7O75251 213 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 STAM2O75886 525 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 APOA4P06727 396 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 SRCP12931 536 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 SCG2P13521 617 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 CCND2P30279 289 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 ICAM3P32942 547 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 CPOXP36551 454 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 PSMB10P40306 273 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 ACLYP53396 1101 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 NAPAP54920 295 aa4.81□□□□□ -1.64
LINC00254-201ENST00000563416 EIF3BP55884 814 aaKnown RBP4.81□□□□□ -1.64
LINC00254-201ENST00000563416 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
LINC00254-201ENST00000563416 OASLQ15646 514 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms