RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZBTB18Q99592 522 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 RAD9AQ99638 391 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 UBAC1Q9BSL1 405 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 ENKD1Q9H0I2 346 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 TKTL2Q9H0I9 626 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC6A17Q9H1V8 727 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 VCX2Q9H322 139 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SRD5A3Q9H8P0 318 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 SAP30LQ9HAJ7 183 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 GLOD4Q9HC38 313 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PCDH18Q9HCL0 1135 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PIH1D3Q9NQM4 214 aaKnown RBP5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 PANK4Q9NVE7 773 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 OR6C3Q9NZP0 311 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 NLKQ9UBE8 527 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 UPB1Q9UBR1 384 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 MALT1Q9UDY8 824 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 DLGAP4Q9Y2H0 992 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 VWA7Q9Y334 891 aa5.12□□□□□ -1.59
VPS35P1-201ENST00000563400 DICER1Q9UPY3 1922 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 LRRC37AA6NMS7 1700 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SNED1Q8TER0 1413 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 UBE4BO95155 1302 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ZMYM6O95789 1325 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CCDC171Q6TFL3 1326 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SDR42E2A6NKP2 422 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ZAR1LA6NP61 321 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TRIM77I1YAP6 450 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PPP6CO00743 305 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 HS3ST1O14792 307 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 FFAR3O14843 346 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 GPR42O15529 346 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 GPAA1O43292 621 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 LANCL1O43813 399 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 IGHEP01854 428 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ALDOAP04075 364 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SPATA31D3P0C874 917 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CALM1P0DP23 149 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CALM2P0DP24 149 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CALM3P0DP25 149 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PKMP14618 531 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ITGAXP20702 1163 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PTBP1P26599 531 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CCND3P30281 292 aaPredicted RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TIA1P31483 386 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CCT6AP40227 531 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ITGA1P56199 1179 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 HNRNPKP61978 463 aaKnown RBP eCLIP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ATP2C1P98194 919 aaPredicted RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 MC2RQ01718 297 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SPAG1Q07617 926 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TCP10Q12799 353 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ABRQ12979 859 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PDZK1IP1Q13113 114 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CSRP2Q16527 193 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 ERCC6LQ2NKX8 1250 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 EDRF1Q3B7T1 1238 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 KRT40Q6A162 431 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM88Q6PEY1 159 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 RANBP10Q6VN20 620 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SPATA31D4Q6ZUB0 917 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PIGWQ7Z7B1 504 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 MCEMP1Q8IX19 187 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM184AQ8NB25 1140 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 OR8J1Q8NGP2 316 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SGCDQ92629 289 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 LPAR1Q92633 364 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC25A28Q96A46 364 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 WDYHV1Q96HA8 205 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 AJUBAQ96IF1 538 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 EPSTI1Q96J88 318 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 RPL10LQ96L21 214 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CCT7Q99832 543 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 JPH2Q9BR39 696 aaPredicted RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SIKE1Q9BRV8 207 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CCDC94Q9BW85 323 aaPredicted RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 C1QTNF1Q9BXJ1 281 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TRIM2Q9C040 744 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 PPIL3Q9H2H8 161 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 NSUN3Q9H649 340 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 LMAN1LQ9HAT1 526 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 RAB20Q9NX57 234 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM30AQ9NZY2 134 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 NKX1-2Q9UD57 310 aaPredicted RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TRIM10Q9UDY6 481 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC25A13Q9UJS0 675 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 CLEC4AQ9UMR7 237 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 DTX4Q9Y2E6 619 aa5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 BRCA1P38398 1863 aaKnown RBP5.11□□□□□ -1.59
VPS35P1-201ENST00000563400 TNRC6CQ9HCJ0 1690 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 COL2A1P02458 1487 aaPredicted RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM230AA0A1W2PPH8 454 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 C1orf226A1L170 272 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PMS2P1A4D2B8 440 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MAGEA13PA6NCF6 341 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PRR5-ARHGAP8B1AHC4 643 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 EBAG9O00559 213 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SEC14L5O43304 696 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 RSL1D1O76021 490 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms