RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SLC6A9P48067 706 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SUOXP51687 545 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 EFNA5P52803 228 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ANTXR2P58335 489 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TNNC1P63316 161 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TAP1Q03518 808 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ENPP2Q13822 863 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 GCKRQ14397 625 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CAPRIN1Q14444 709 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 LBHQ53QV2 105 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 ZNF667Q5HYK9 610 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 AARS2Q5JTZ9 985 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 CARD17Q5XLA6 110 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 STEAP3Q658P3 488 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ARSKQ6UWY0 536 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 PLCZ1Q86YW0 608 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SLC38A6Q8IZM9 456 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 KBTBD3Q8NAB2 608 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SRFBP1Q8NEF9 429 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 OR10T2Q8NGX3 314 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ZCCHC10Q8TBK6 192 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 HMGB4Q8WW32 186 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 DNASE1L2Q92874 299 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 MRGPRFQ96AM1 343 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 C4orf36Q96KX1 117 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 PANX3Q96QZ0 392 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 DSCC1Q9BVC3 393 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 GRIP2Q9C0E4 1043 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 LHX5Q9H2C1 402 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CNOT10Q9H9A5 744 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 ANKRA2Q9H9E1 313 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 AKIRIN1Q9H9L7 192 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 MAN2C1Q9NTJ4 1040 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 GRHL1Q9NZI5 618 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 HEY2Q9UBP5 337 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TRIM10Q9UDY6 481 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SIX4Q9UIU6 781 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TINAGQ9UJW2 476 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ADAM30Q9UKF2 790 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CA14Q9ULX7 337 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TROQ12816 1431 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 NWD2Q9ULI1 1742 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TRAV25A0A0B4J276 109 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ARHGAP42A6NI28 874 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 FAM47E-STBD1D6RA91 191 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 KCNN4O15554 427 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ADAM12O43184 909 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 B4GAT1O43505 415 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 RNF13O43567 381 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SERPINI2O75830 405 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CD2BP2O95400 341 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 BRI3O95415 125 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 GLP2RO95838 553 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 BCL10O95999 233 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 H2AFB2P0C5Z0 115 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TCF4P15884 667 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 UGT1A6P19224 532 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 HNRNPH1P31943 449 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 PTPN9P43378 593 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 KIR3DL2P43630 455 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 RAB28P51157 221 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ROR2Q01974 943 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 BTBD8Q5XKL5 378 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CLEC6AQ6EIG7 209 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SLC27A1Q6PCB7 646 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ZC3H14Q6PJT7 736 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 PARS2Q7L3T8 475 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 CENPLQ8N0S6 344 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 OR8K1Q8NGG5 319 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 RAB1CQ92928 201 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 FAM110AQ9BQ89 295 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 OR2AG1Q9H205 316 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 GAL3ST2Q9H3Q3 398 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 EPB41L1Q9H4G0 881 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 NT5MQ9NPB1 228 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 TLR9Q9NR96 1032 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 CNNM1Q9NRU3 951 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 RBAKQ9NYW8 714 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 SPG21Q9NZD8 308 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 KLHL8Q9P2G9 620 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 KCNN3Q9UGI6 736 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 WARS2Q9UGM6 360 aaKnown RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 HAO1Q9UJM8 370 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ZNF148Q9UQR1 794 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 ZDHHC9Q9Y397 364 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMG1-207ENST00000563235 POLR3AO14802 1390 aaPredicted RBP4.68□□□□□ -1.66
SMG1-207ENST00000563235 NRKQ7Z2Y5 1582 aa4.68□□□□□ -1.66
SMG1-207ENST00000563235 AK9Q5TCS8 1911 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 A0A087WUV0 522 aaPredicted RBP4.67□□□□□ -1.66
SMG1-207ENST00000563235 MACROD2A1Z1Q3 448 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 PIPSLA2A3N6 862 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 SH2D7A6NKC9 451 aaPredicted RBP4.67□□□□□ -1.66
SMG1-207ENST00000563235 ANKRD28O15084 1053 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 FANCGO15287 622 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 WDR47O94967 919 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 VAMP5O95183 116 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 DNASE1P24855 282 aa4.67□□□□□ -1.66
SMG1-207ENST00000563235 AZGP1P25311 298 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms