RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TMEM71Q6P5X7 295 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 ARHGAP22Q7Z5H3 698 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 STRA8Q7Z7C7 330 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 B3GNT8Q7Z7M8 397 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 ZNF761Q86XN6 746 aaPredicted RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 CARFQ8N187 725 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 SIDT2Q8NBJ9 832 aaKnown RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 OR10G6Q8NH81 332 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 CDKL2Q92772 493 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 INPP5DQ92835 1189 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 GATA6Q92908 595 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 PDLIM5Q96HC4 596 aaKnown RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 VPS39Q96JC1 886 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 NDNQ99608 321 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 GPR21Q99679 349 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 RBBP8Q99708 897 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 OLFM1Q99784 485 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 POPDC3Q9HBV1 291 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 PPANQ9NQ55 473 aaKnown RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 TAS2R13Q9NYV9 303 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.06□□□□□ -0.32
CDH1-204ENST00000562118 FAM8A1Q9UBU6 413 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 POLG2Q9UHN1 485 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 VWA7Q9Y334 891 aa13.06□□□□□ -0.32
CDH1-204ENST00000562118 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 OR5K3A6NET4 321 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 E5RI56 91 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TMX2-CTNND1H3BSU7 103 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 GFYI3L273 518 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TOX3O15405 576 aaPredicted RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 CSO75390 466 aaKnown RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 VPS26AO75436 327 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 C1orf105O95561 183 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 PROS1P07225 676 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 FAM153BP0C7A2 387 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 CHRM3P20309 590 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ALDH4A1P30038 563 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TARDBPQ13148 414 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH1-204ENST00000562118 RTP5Q14D33 572 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 BRD3Q15059 726 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TTLL9Q3SXZ7 439 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 FAM153CQ494X1 144 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 TEX35Q5T0J7 233 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 LRRC8EQ6NSJ5 796 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 UGT3A1Q6NUS8 523 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TRMT10CQ7L0Y3 403 aaKnown RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 PIM3Q86V86 326 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 DCUN1D3Q8IWE4 304 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 Q8N9G6 341 aaPredicted RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 OR52E1Q8NGJ3 308 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 FLVCR1-AS1Q8TAF5 88 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ASB11Q8WXH4 323 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ANKRD7Q92527 254 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 RSC1A1Q92681 617 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ISL2Q96A47 359 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 PRR11Q96HE9 360 aaPredicted RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 TMEM74Q96NL1 305 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ABCG4Q9H172 646 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 CCDC68Q9H2F9 335 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 TRIT1Q9H3H1 467 aaKnown RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ATXN7L1Q9ULK2 861 aaPredicted RBP13.05□□□□□ -0.32
CDH1-204ENST00000562118 ICKQ9UPZ9 632 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 ASF1AQ9Y294 204 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 LAMA5O15230 3695 aa13.05□□□□□ -0.32
CDH1-204ENST00000562118 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 HMX2A2RU54 273 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 MYO1CO00159 1063 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 MATN2O00339 956 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 HGSO14964 777 aaPredicted RBP13.04□□□□□ -0.32
CDH1-204ENST00000562118 PIAS1O75925 651 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 DXOO77932 396 aaKnown RBP13.04□□□□□ -0.32
CDH1-204ENST00000562118 RPN2P04844 631 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 ZNF37AP17032 561 aaPredicted RBP13.04□□□□□ -0.32
CDH1-204ENST00000562118 PKLRP30613 574 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 PHBP35232 272 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 CCNFP41002 786 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 ABCG1P45844 678 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 INHBCP55103 352 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 POU4F1Q01851 419 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 EIF3IQ13347 325 aaKnown RBP13.04□□□□□ -0.32
CDH1-204ENST00000562118 KLHL38Q2WGJ6 581 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.04□□□□□ -0.32
CDH1-204ENST00000562118 GRTP1Q5TC63 336 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 NKAIN2Q5VXU1 208 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 TMEM207Q6UWW9 146 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 ADGRF3Q8IZF5 1079 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 CYTH2Q99418 400 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 CD180Q99467 661 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 SEMA6CQ9H3T2 930 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
CDH1-204ENST00000562118 TMEM9Q9P0T7 183 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms