RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FARSBQ9NSD9 589 aaKnown RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 ACTR3BQ9P1U1 418 aa9.6□□□□□ -0.87
SMG1-205ENST00000561947 ZNF490Q9ULM2 529 aaPredicted RBP9.6□□□□□ -0.87
SMG1-205ENST00000561947 C15orf38-AP3S2A0A0A6YYH1 394 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 C16orf96A6NNT2 1141 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 FADS2P1A8MWK0 482 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 TXNDC9O14530 226 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 CLDN9O95484 217 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ADH1CP00326 375 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 HIST1H2AGP0C0S8 130 aaPredicted RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 MYOGP15173 224 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 EPORP19235 508 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 HIST1H2ADP20671 130 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 MMP12P39900 470 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 CASP2P42575 452 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 SLC6A12P48065 614 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 HNMTP50135 292 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 EEFSECP57772 596 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 MAD2L1Q13257 205 aaPredicted RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 OR52E8Q6IFG1 317 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 FBXL19Q6PCT2 694 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 SLC2A7Q6PXP3 512 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ARPINQ7Z6K5 226 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 TECPR1Q7Z6L1 1165 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 KIAA2013Q8IYS2 634 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 C7orf61Q8IZ16 206 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ZNF366Q8N895 744 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 KIAA1958Q8N8K9 716 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 SMG7Q92540 1137 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 ELMO1Q92556 727 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 USP7Q93009 1102 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 HIST1H2AHQ96KK5 128 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 HIST1H2AJQ99878 128 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 H2AFJQ9BTM1 129 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 TRIM8Q9BZR9 551 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ALG2Q9H553 416 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ARMC1Q9NVT9 282 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 EGFL7Q9UHF1 273 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 CNOT11Q9UKZ1 510 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 RAB26Q9ULW5 256 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 EIF3LQ9Y262 564 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 ZFC3H1O60293 1989 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 ATG2AQ2TAZ0 1938 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 PABPN1LA6NDY0 278 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 GFYI3L273 518 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ARNTLO00327 626 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ARPC2O15144 300 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 DENRO43583 198 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 FTH1P02794 183 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 LINGO3P0C6S8 592 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 PIM1P11309 404 aaPredicted RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 CYP2A7P20853 494 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 GNPDA1P46926 289 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 GSK3BP49841 420 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ST8SIA6P61647 398 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 LIPEQ05469 1076 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 INPP5AQ14642 412 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 IMPG1Q17R60 797 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ZNF284Q2VY69 593 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 POM121L1PQ3SYA9 428 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 RABL3Q5HYI8 236 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 PDE12Q6L8Q7 609 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 PRR23BQ6ZRT6 265 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 RBM23Q86U06 439 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 GALNT13Q8IUC8 556 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 MTIF3Q9H2K0 278 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 Q9H521 79 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 ACTR8Q9H981 624 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 LRTM1Q9HBL6 345 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 INTS7Q9NVH2 962 aaKnown RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 ASIC5Q9NY37 505 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 SLAMF8Q9P0V8 285 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 PDP2Q9P2J9 529 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 SLC27A6Q9Y2P4 619 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 MUC22E2RYF6 1773 aaPredicted RBP9.59□□□□□ -0.87
SMG1-205ENST00000561947 LRRK1Q38SD2 2015 aa9.59□□□□□ -0.87
SMG1-205ENST00000561947 TULP3O75386 442 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 RSL1D1O76021 490 aaKnown RBP9.59□□□□□ -0.88
SMG1-205ENST00000561947 KRT6AP02538 564 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 KRT6BP04259 564 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 ZCCHC18P0CG32 403 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 VARSP26640 1264 aaKnown RBP9.59□□□□□ -0.88
SMG1-205ENST00000561947 KRT6CP48668 564 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 HSPA13P48723 471 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 AP1S2P56377 157 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 HMGCS1Q01581 520 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 KIAA0040Q15053 153 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 PDK3Q15120 406 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 ZXDCQ2QGD7 858 aaPredicted RBP9.59□□□□□ -0.88
SMG1-205ENST00000561947 GGTA1PQ4G0N0 100 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 SGO1Q5FBB7 561 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 LDLRAP1Q5SW96 308 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 NANOGP8Q6NSW7 305 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 ERAP2Q6P179 960 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 PARS2Q7L3T8 475 aaKnown RBP9.59□□□□□ -0.88
SMG1-205ENST00000561947 PTRH1Q86Y79 214 aaKnown RBP9.59□□□□□ -0.88
SMG1-205ENST00000561947 SPPL2CQ8IUH8 684 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 HID1Q8IV36 788 aa9.59□□□□□ -0.88
SMG1-205ENST00000561947 RASGRP3Q8IV61 690 aa9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms