RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 COPS8Q99627 209 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 NHEJ1Q9H9Q4 299 aaPredicted RBP11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 ABHD10Q9NUJ1 306 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 ASF1BQ9NVP2 202 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 MAP10Q9P2G4 905 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 B3GNT3Q9Y2A9 372 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 AAR2Q9Y312 384 aaKnown RBP11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 AP1M2Q9Y6Q5 423 aa11.46□□□□□ -0.57
CARMIL3-204ENST00000561354 PCSK5Q92824 1860 aa11.46□□□□□ -0.58
CARMIL3-204ENST00000561354 IGLV3-16A0A075B6K0 115 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 KRT86O43790 486 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 IPO13O94829 963 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 CLDN1O95832 211 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ALPPP05187 535 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 PVRP15151 417 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ITGALP20701 1170 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 OTX2P32243 289 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 HADHBP55084 474 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 SOX8P57073 446 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 RPA4Q13156 261 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 BOP1Q14137 746 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 MYBPC3Q14896 1274 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 NR6A1Q15406 480 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 GPR33Q49SQ1 333 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ZRANB3Q5FWF4 1079 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 DCAF10Q5QP82 559 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 RHBDD2Q6NTF9 364 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ZNF449Q6P9G9 518 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 SNX20Q7Z614 316 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 GPR135Q8IZ08 494 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ADGRF3Q8IZF5 1079 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 BARD1Q99728 777 aaKnown RBP11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 CHRNA10Q9GZZ6 450 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 VPS37BQ9H9H4 285 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ACTR10Q9NZ32 417 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 SLC5A6Q9Y289 635 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 ALG6Q9Y672 507 aa11.45□□□□□ -0.58
CARMIL3-204ENST00000561354 CACNA1DQ01668 2161 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 H3BMH7 237 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 APOC4-APOC2K7ER74 178 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 PEX12O00623 359 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 OR2B3O76000 313 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 APOC2P02655 101 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 GSTM1P09488 218 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 RBL1P28749 1068 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 DCTP40126 519 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 GSTM4Q03013 218 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 RAPSNQ13702 412 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 KYNUQ16719 465 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 CRB2Q5IJ48 1285 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 MLIPQ5VWP3 458 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 LYPLAL1Q5VWZ2 237 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 SPESP1Q6UW49 350 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 GALNT16Q8N428 558 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 CISD2Q8N5K1 135 aaKnown RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 CLEC1AQ8NC01 280 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 PHC3Q8NDX5 983 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 OR13C4Q8NGS5 318 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 PROKR1Q8TCW9 393 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 TM9SF4Q92544 642 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 TFGQ92734 400 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 PTERQ96BW5 349 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 HAUS1Q96CS2 278 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 C5orf34Q96MH7 638 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 NRTNQ99748 197 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 APOL2Q9BQE5 337 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 FERMT1Q9BQL6 677 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 KLHL25Q9H0H3 589 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 KCNF1Q9H3M0 494 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 ZNF552Q9H707 407 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 ARNT2Q9HBZ2 717 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 FAM60AQ9NP50 221 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 ZDHHC3Q9NYG2 299 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 FEZ2Q9UHY8 353 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 UTP20O75691 2785 aaKnown RBP11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 PIKFYVEQ9Y2I7 2098 aa11.44□□□□□ -0.58
CARMIL3-204ENST00000561354 NBPF19A0A087WUL8 3843 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 TRBV5-4A0A0C4DH59 114 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 ANKUB1A6NFN9 424 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 H7C0C1 242 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 LDB2O43679 373 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 MFAP3LO75121 409 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 TPM1P09493 284 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 CBSLP0DN79 551 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 COL8A1P27658 744 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 PDHA2P29803 388 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 SHMT2P34897 504 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 CBSP35520 551 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 FOLR3P41439 243 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 ATP5OP48047 213 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 GABRA4P48169 554 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 TERF1P54274 439 aa11.43□□□□□ -0.58
CARMIL3-204ENST00000561354 DCDP81605 110 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms