RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 C11orf74Q86VG3 221 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 IQCHQ86VS3 1027 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 SPATS2Q86XZ4 545 aaKnown RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 RASGRP3Q8IV61 690 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 MFSD2AQ8NA29 543 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 TFGQ92734 400 aaPredicted RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 ATP6V1E2Q96A05 226 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 RAD51AP1Q96B01 352 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 SKA1Q96BD8 255 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 SORT1Q99523 831 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 CD244Q9BZW8 370 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 C20orf27Q9GZN8 174 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 OSGEPL1Q9H4B0 414 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 GSTO2Q9H4Y5 243 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 STN1Q9H668 368 aaKnown RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 ZNF395Q9H8N7 513 aaPredicted RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 TRNAU1APQ9NX07 287 aaKnown RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 KCNK4Q9NYG8 393 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 DLGAP2Q9P1A6 1054 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 OPTCQ9UBM4 332 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 SLC23A2Q9UGH3 650 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 LNPEPQ9UIQ6 1025 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 HAO1Q9UJM8 370 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 APOBEC2Q9Y235 224 aaKnown RBP10.06□□□□□ -0.8
USP3-219ENST00000561326 INVSQ9Y283 1065 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 CA5BQ9Y2D0 317 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 USH1CQ9Y6N9 552 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
USP3-219ENST00000561326 A0A0G2JND7 137 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 TMEM221A6NGB7 291 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 TRPC5OSA6NMA1 111 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 H0Y8X5 98 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 K7EPI3 171 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 M0R296 226 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 HDAC3O15379 428 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 PI15O43692 258 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 KDM1AO60341 852 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CCNT2O60583 730 aaKnown RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 KATNA1O75449 491 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CRCPO75575 148 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 RASGRP1O95267 797 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 C1orf105O95561 183 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FUCA1P04066 466 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CHRNGP07510 517 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FGF4P08620 206 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 THEGLP0DJG4 465 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 EPB42P16452 691 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 ACADLP28330 430 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CD38P28907 300 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 HSD17B2P37059 387 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 HSPA7P48741 367 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CLCNKAP51800 687 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CDH13P55290 713 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 PKNOX1P55347 436 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 RACK1P63244 317 aaKnown RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 LCP2Q13094 533 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 KRT33BQ14525 404 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 RBBP7Q16576 425 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 WDR45BQ5MNZ6 344 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FAM83HQ6ZRV2 1179 aaPredicted RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 LPCAT2Q7L5N7 544 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CLYBLQ8N0X4 340 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 LSMEM2Q8N112 164 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 CHCHD4Q8N4Q1 142 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 RAB42Q8N4Z0 105 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 LILRA3Q8N6C8 439 aaPredicted RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 PHC3Q8NDX5 983 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 OR13H1Q8NG92 308 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 OR9A1PQ8NGU1 263 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 TRPC4APQ8TEL6 797 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 ZNF483Q8TF39 744 aaPredicted RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 UBTD2Q8WUN7 234 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 OR1E3Q8WZA6 343 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 DLG3Q92796 817 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FBXL8Q96CD0 374 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 THOC1Q96FV9 657 aaKnown RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 RILPQ96NA2 401 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 NECAB3Q96P71 396 aaPredicted RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 WWP1Q9H0M0 922 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 DUSP15Q9H1R2 295 aaPredicted RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 OR52A5Q9H2C5 316 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 SLC32A1Q9H598 525 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 EBF2Q9HAK2 575 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 FGF22Q9HCT0 170 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 MID1IP1Q9NPA3 183 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 TM7SF3Q9NS93 570 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 PNPOQ9NVS9 261 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 EIF2B4Q9UI10 523 aaKnown RBP10.05□□□□□ -0.8
USP3-219ENST00000561326 DCTN4Q9UJW0 460 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 PCTPQ9UKL6 214 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 ASF1AQ9Y294 204 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 HEBP2Q9Y5Z4 205 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 DGKBQ9Y6T7 804 aa10.05□□□□□ -0.8
USP3-219ENST00000561326 HEATR5BQ9P2D3 2071 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 SPTY2D1-AS1A0A0U1RR47 76 aa10.04□□□□□ -0.8
USP3-219ENST00000561326 ZNF839A8K0R7 811 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1714.6 ms