RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 FBXO36Q8NEA4 188 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 CFAP61Q8NHU2 1237 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SNIP1Q8TAD8 396 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 ZFPM2Q8WW38 1151 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 FGF11Q92914 225 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ART4Q93070 314 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 TMEM159Q96B96 161 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ZNF578Q96N58 590 aaPredicted RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 MAP3K3Q99759 626 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 CMKLR1Q99788 373 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 MENTQ9BUN1 341 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 RAB33BQ9H082 229 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 ZMYND15Q9H091 742 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 EPB41L1Q9H4G0 881 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SMYD2Q9NRG4 433 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 LATS2Q9NRM7 1088 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 INTS10Q9NVR2 710 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 HRASLS2Q9NWW9 162 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 SIDT1Q9NXL6 827 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 ZC3H7BQ9UGR2 993 aaKnown RBP13.51□□□□□ -0.25
TPM1-230ENST00000561266 ASF1AQ9Y294 204 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 PCM1Q15154 2024 aa13.51□□□□□ -0.25
TPM1-230ENST00000561266 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 PTPRQQ9UMZ3 2332 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 IFRD1O00458 451 aaPredicted RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 KRT37O76014 449 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 AHSGP02765 367 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 ESR1P03372 595 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 ITGA2BP08514 1039 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 JMJD7P0C870 316 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 RBMS1P29558 406 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 PEBP1P30086 187 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 BDKRB1P46663 353 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 ERVPABLB-1P60509 514 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 SRSF6Q13247 344 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 EIF3IQ13347 325 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 KRT33BQ14525 404 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 TGIF1Q15583 401 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 UBAP2Q5T6F2 1119 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 CACHD1Q5VU97 1274 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 ZFAND4Q86XD8 727 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 CNTN4Q8IWV2 1026 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 ADGRF3Q8IZF5 1079 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 AGBL5Q8NDL9 886 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 FBXO25Q8TCJ0 367 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 KLHL6Q8WZ60 621 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 CERS2Q96G23 380 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 DCBLD2Q96PD2 775 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 IL17FQ96PD4 163 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 NDNQ99608 321 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 CTRCQ99895 268 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 TWSG1Q9GZX9 223 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 TFB2MQ9H5Q4 396 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 MVB12BQ9H7P6 319 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 SPHK1Q9NYA1 384 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 SEMA5BQ9P283 1151 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 DMGDHQ9UI17 866 aaKnown RBP13.5□□□□□ -0.25
TPM1-230ENST00000561266 HEBP2Q9Y5Z4 205 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 PSAT1Q9Y617 370 aa13.5□□□□□ -0.25
TPM1-230ENST00000561266 SMAPO00193 183 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 APOA4P06727 396 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 ANKRD34CP0C6C1 535 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 CHRM3P20309 590 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 NDUFS1P28331 727 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
TPM1-230ENST00000561266 PLTPP55058 493 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 CDKN2DP55273 166 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 CKAP4Q07065 602 aaKnown RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 CUL1Q13616 776 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 KCNAB1Q14722 419 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 ANKS6Q68DC2 871 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 CAPN12Q6ZSI9 719 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 PRSS42Q7Z5A4 293 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 TBC1D21Q8IYX1 336 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 LSMEM2Q8N112 164 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 OR5K2Q8NHB8 316 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 HNRNPLLQ8WVV9 542 aaKnown RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 ASZ1Q8WWH4 475 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 LCN9Q8WX39 176 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 PANX3Q96QZ0 392 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 AARSD1Q9BTE6 412 aaKnown RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 ZNF768Q9H5H4 540 aaKnown RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
TPM1-230ENST00000561266 TDRKHQ9Y2W6 561 aaKnown RBP13.49□□□□□ -0.25
TPM1-230ENST00000561266 A0A087WV48 116 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms