RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 AGAP7PQ5VUJ5 663 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 PRAMEF13Q5VWM6 474 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 RPUSD3Q6P087 351 aaKnown RBP17.91■□□□□ 0.46
TPM1-226ENST00000560959 TLDC1Q6P9B6 456 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 SPESP1Q6UW49 350 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 NPNTQ6UXI9 565 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 H2AFVQ71UI9 128 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 ADGRF3Q8IZF5 1079 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 OR52E1Q8NGJ3 308 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 HEXDCQ8WVB3 486 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 AGAP4Q96P64 663 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 FCRL5Q96RD9 977 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 SLX1AQ9BQ83 275 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 ACTR10Q9NZ32 417 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 NENFQ9UMX5 172 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 ADGRG4Q8IZF6 3080 aa17.91■□□□□ 0.46
TPM1-226ENST00000560959 AKAP9Q99996 3911 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 IFRD1O00458 451 aaPredicted RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 CNOT3O75175 753 aaKnown RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 SRP72O76094 671 aaKnown RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 PVRP15151 417 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 MMP11P24347 488 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 CHRNA4P43681 627 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 WASHC5Q12768 1159 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 MPP3Q13368 585 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 TLR1Q15399 786 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 C1orf189Q5VU69 101 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 DAAM2Q86T65 1068 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 SLC25A41Q8N5S1 370 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 LILRA3Q8N6C8 439 aaPredicted RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 C19orf47Q8N9M1 422 aaKnown RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 DCUN1D1Q96GG9 259 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 RBM41Q96IZ5 413 aaKnown RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 VAT1Q99536 393 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 C19orf43Q9BQ61 176 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 SPRTNQ9H040 489 aaPredicted RBP17.9■□□□□ 0.46
TPM1-226ENST00000560959 OR52A5Q9H2C5 316 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 ASB8Q9H765 288 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 FAM60AQ9NP50 221 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 CSAG2Q9Y5P2 127 aa17.9■□□□□ 0.46
TPM1-226ENST00000560959 ZSCAN9O15535 394 aaPredicted RBP17.89■□□□□ 0.45
TPM1-226ENST00000560959 BUD23O43709 281 aaKnown RBP17.89■□□□□ 0.45
TPM1-226ENST00000560959 ZBED6P86452 979 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 CDC16Q13042 620 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 RPA4Q13156 261 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 HIF1AQ16665 826 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 LRRC38Q5VT99 294 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 HOOK3Q86VS8 718 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 TFB1MQ8WVM0 346 aaKnown RBP17.89■□□□□ 0.45
TPM1-226ENST00000560959 CTNNBL1Q8WYA6 563 aaPredicted RBP17.89■□□□□ 0.45
TPM1-226ENST00000560959 ULK4Q96C45 1275 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 IQCDQ96DY2 449 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 KLHL25Q9H0H3 589 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 EPS8L2Q9H6S3 715 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 TXLNGQ9NUQ3 528 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 FAM8A1Q9UBU6 413 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 CDYLQ9Y232 598 aa17.89■□□□□ 0.45
TPM1-226ENST00000560959 F8P00451 2351 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 C5orf60A6NFR6 353 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 C2orf81A6NN90 581 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 MASP2O00187 686 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 ONECUT2O95948 504 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 ALBP02768 609 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 ATP1B2P14415 290 aaPredicted RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 NFKB1P19838 968 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 OTUD4Q01804 1114 aaKnown RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 TYRO3Q06418 890 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 TAF1AQ15573 450 aaPredicted RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 ZNF658BQ4V348 819 aaPredicted RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 IRAK1BP1Q5VVH5 260 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 ZNF449Q6P9G9 518 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 FJX1Q86VR8 437 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 DENND1AQ8TEH3 1009 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 FKBP10Q96AY3 582 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 OXNAD1Q96HP4 312 aaPredicted RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 LMF1Q96S06 567 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 COG4Q9H9E3 785 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 SLC6A20Q9NP91 592 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 CHST11Q9NPF2 352 aa17.88■□□□□ 0.45
TPM1-226ENST00000560959 DHCR7Q9UBM7 475 aaKnown RBP17.88■□□□□ 0.45
TPM1-226ENST00000560959 ZFHX3Q15911 3703 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 CFAP99D6REC4 459 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 GSTM1P09488 218 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 ARHGAP25P42331 645 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 XIAPP98170 497 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 GSTM4Q03013 218 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 BOP1Q14137 746 aaKnown RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 ZIC1Q15915 447 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 SLC5A12Q1EHB4 618 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 FAM180AQ6UWF9 173 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 PID1Q7Z2X4 250 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 GDF7Q7Z4P5 450 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 ZC3H18Q86VM9 953 aaKnown RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 ZNF655Q8N720 491 aaPredicted RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 BCORP1Q8N888 145 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 OR4K2Q8NGD2 314 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 TFGQ92734 400 aaPredicted RBP17.87■□□□□ 0.45
TPM1-226ENST00000560959 VPS50Q96JG6 964 aa17.87■□□□□ 0.45
TPM1-226ENST00000560959 OR2A14Q96R47 310 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms