RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	TMEM150C	B9EJG8	249 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	IFRD1	O00458	451 aa	Predicted RBP	13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	CCL22	O00626	93 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	MAP3K7	O43318	606 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	ZNF189	O75820	626 aa	Predicted RBP	13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	KLF7	O75840	302 aa	Predicted RBP	13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	TJP3	O95049	919 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	HBQ1	P09105	142 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	ACRV1	P26436	265 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	ACADL	P28330	430 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	MC4R	P32245	332 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	GABRA4	P48169	554 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	VAV2	P52735	878 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	RWDD2B	P57060	319 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	CHAF1B	Q13112	559 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	ZNF449	Q6P9G9	518 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	CDHR3	Q6ZTQ4	885 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	AMIGO1	Q86WK6	493 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	SYTL1	Q8IYJ3	562 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	CLDN19	Q8N6F1	224 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	RNF214	Q8ND24	703 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	FDCSP	Q8NFU4	85 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	OR52E1	Q8NGJ3	308 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	ALG3	Q92685	438 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	LRRC4C	Q9HCJ2	640 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	LUC7L	Q9NQ29	371 aa	Known RBP	13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	DOCK10	Q96BY6	2186 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	CNTRL	Q7Z7A1	2325 aa		13.22	□□□□□ -0.29
RNF31-223	ENST00000560754	GSAP	A4D1B5	854 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	MROH6	A6NGR9	719 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	DDX3Y	O15523	660 aa	Known RBP	13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	ZNF749	O43361	778 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	AP2A2	O94973	939 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	TPBGL	P0DKB5	382 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	GNLY	P22749	145 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	CYLC1	P35663	651 aa	Predicted RBP	13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	UQCRFS1	P47985	274 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	PRKG2	Q13237	762 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	FAM69B	Q5VUD6	431 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	AADACL2	Q6P093	401 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	FAM198B	Q6UWH4	519 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	PIANP	Q8IYJ0	282 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	EFCAB3	Q8N7B9	438 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	LRRC57	Q8N9N7	239 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754		Q8NA96	180 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	FLVCR1-AS1	Q8TAF5	88 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	STYX	Q8WUJ0	223 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	TCTN2	Q96GX1	697 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	DNAJC1	Q96KC8	554 aa	Known RBP	13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	SMAD5	Q99717	465 aa	Known RBP	13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	FAM118B	Q9BPY3	351 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	NUDT9	Q9BW91	350 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	VPS37B	Q9H9H4	285 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	FAM60A	Q9NP50	221 aa		13.21	□□□□□ -0.29
RNF31-223	ENST00000560754	CACNA1D	Q01668	2161 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754		E7EQ34	232 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	LIN7A	O14910	233 aa	Predicted RBP	13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	DPM1	O60762	260 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	METTL18	O95568	372 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	PRSS56	P0CW18	603 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	PVR	P15151	417 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	TPH1	P17752	444 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	CYP2A7	P20853	494 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	CETN2	P41208	172 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	LMAN1	P49257	510 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	RRAD	P55042	308 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	CACNG1	Q06432	222 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	SSPN	Q14714	243 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	NCF4	Q15080	339 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	INPP5J	Q15735	1006 aa	Predicted RBP	13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	ZRANB3	Q5FWF4	1079 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	FHL5	Q5TD97	284 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	SPESP1	Q6UW49	350 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	UNC5A	Q6ZN44	842 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	TAS2R42	Q7RTR8	314 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	TMTC1	Q8IUR5	882 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	LRRC45	Q96CN5	670 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	IP6K3	Q96PC2	410 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	OR2A14	Q96R47	310 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	PANX2	Q96RD6	677 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	DHRS4	Q9BTZ2	278 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	TRIM5	Q9C035	493 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	LACRT	Q9GZZ8	138 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	XKR8	Q9H6D3	395 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	ACTR10	Q9NZ32	417 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	C5AR2	Q9P296	337 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	ICK	Q9UPZ9	632 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	REXO2	Q9Y3B8	237 aa	Known RBP	13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	AP1M2	Q9Y6Q5	423 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	LRBA	P50851	2863 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	PCM1	Q15154	2024 aa		13.2	□□□□□ -0.3
RNF31-223	ENST00000560754	POLE	Q07864	2286 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC5A10	A0PJK1	596 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	ZNF185	O15231	689 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	PSMD3	O43242	534 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	HCRTR1	O43613	425 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms