RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 C1QAP02745 245 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 FTH1P02794 183 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 GSTA1P08263 222 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PYGBP11216 843 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 NEFHP12036 1026 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 COL6A2P12110 1019 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 ATP1B2P14415 290 aaPredicted RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 NR1D1P20393 614 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 KELP23276 732 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 RPS3P23396 243 aaKnown RBP eCLIP11.56□□□□□ -0.567e-8■■□□□ 12.5
LDLR-212ENST00000560467 HTR1BP28222 390 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 OAS2P29728 719 aaKnown RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 SLC26A3P40879 764 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PPP2R2AP63151 447 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 AGERQ15109 404 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 DBN1Q16643 649 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 FAM83EQ2M2I3 478 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 GPRC6AQ5T6X5 926 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 HENMT1Q5T8I9 393 aaKnown RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 HECTD2Q5U5R9 776 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PNCKQ6P2M8 343 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 CNSTQ6PJW8 725 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 ADAMTSL4Q6UY14 1074 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 USP53Q70EK8 1073 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 RAB11FIP2Q7L804 512 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 LDB1Q86U70 411 aaPredicted RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 PIANPQ8IYJ0 282 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 DYDC1Q8WWB3 177 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 LPGAT1Q92604 370 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 TSACCQ96A04 125 aaPredicted RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 GFM1Q96RP9 751 aaKnown RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 POPDC3Q9HBV1 291 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 GPAMQ9HCL2 828 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PISDQ9UG56 409 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 TRMT6Q9UJA5 497 aaKnown RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 MID2Q9UJV3 735 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 GPR34Q9UPC5 381 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 DOLKQ9UPQ8 538 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 PCDHGA7Q9Y5G6 932 aa11.56□□□□□ -0.56
LDLR-212ENST00000560467 HEMK1Q9Y5R4 338 aaPredicted RBP11.56□□□□□ -0.56
LDLR-212ENST00000560467 BOD1L1Q8NFC6 3051 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TRBV5-4A0A0C4DH59 114 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 AGAP14A8MT82 685 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 GOLGA8RI6L899 631 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 CACNB4O00305 520 aaPredicted RBP11.55□□□□□ -0.56
LDLR-212ENST00000560467 TOR1BO14657 336 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 INPP4BO15327 924 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 VEGFDO43915 354 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 GLRA3O75311 464 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 CDK14O94921 469 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 PCCBP05166 539 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 APOA4P06727 396 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 GSTM1P09488 218 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TEAD1P28347 426 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 RGS4P49798 205 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 CSRP3P50461 194 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 HK3P52790 923 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 INHBCP55103 352 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 YPEL5P62699 121 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 GSTM4Q03013 218 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TTMPQ5BVD1 217 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 AGAP9Q5VTM2 703 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 HHATQ5VTY9 493 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 OTOAQ7RTW8 1153 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 RD3Q7Z3Z2 195 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 VASH2Q86V25 355 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 EXOC3L1Q86VI1 746 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TAX1BP1Q86VP1 789 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 C4orf33Q8N1A6 199 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 FSTL5Q8N475 847 aaPredicted RBP11.55□□□□□ -0.56
LDLR-212ENST00000560467 NKAPQ8N5F7 415 aaKnown RBP11.55□□□□□ -0.56
LDLR-212ENST00000560467 Q8N9G6 341 aaPredicted RBP11.55□□□□□ -0.56
LDLR-212ENST00000560467 CCDC63Q8NA47 563 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 DDHD1Q8NEL9 900 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 KCNJ9Q92806 393 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 INPP5DQ92835 1189 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TLCD1Q96CP7 247 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 SGF29Q96ES7 293 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 NDNQ99608 321 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 AARSD1Q9BTE6 412 aaKnown RBP11.55□□□□□ -0.56
LDLR-212ENST00000560467 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 STRADBQ9C0K7 418 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 WDR26Q9H7D7 661 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 TRIM39Q9HCM9 518 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 SNX15Q9NRS6 342 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 SLC17A6Q9P2U8 582 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 LOXL2Q9Y4K0 774 aa11.55□□□□□ -0.56
LDLR-212ENST00000560467 A0A1W2PPM1 405 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 KLHL33A6NCF5 533 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 GPR89AB7ZAQ6 455 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
LDLR-212ENST00000560467 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
LDLR-212ENST00000560467 TM9SF1O15321 606 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 C2P06681 752 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 GPR89BP0CG08 455 aa11.54□□□□□ -0.56
LDLR-212ENST00000560467 VCLP18206 1134 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms