RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 RASGRP3Q8IV61 690 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 SLC22A15Q8IZD6 547 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 UNC5BQ8IZJ1 945 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 FAM136AQ96C01 138 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.41
BMP4-208ENST00000559642 ZPBPQ9BS86 351 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 TRIM51Q9BSJ1 452 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 ULBP3Q9BZM4 244 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 SPRY4Q9C004 299 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 KLHL25Q9H0H3 589 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 TRIT1Q9H3H1 467 aaKnown RBP12.52□□□□□ -0.41
BMP4-208ENST00000559642 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
BMP4-208ENST00000559642 SOHLH2Q9NX45 425 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 PCYOX1Q9UHG3 505 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 TDRKHQ9Y2W6 561 aaKnown RBP12.52□□□□□ -0.41
BMP4-208ENST00000559642 TMEM184BQ9Y519 407 aaPredicted RBP12.52□□□□□ -0.41
BMP4-208ENST00000559642 SAR1BQ9Y6B6 198 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 NBEAQ8NFP9 2946 aa12.52□□□□□ -0.41
BMP4-208ENST00000559642 FAM237BA0A1B0GVD1 139 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 NIPSNAP2O75323 286 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 GPC4O75487 556 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 APOA4P06727 396 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 PVRP15151 417 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 PAMP19021 973 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 OGNP20774 298 aaKnown RBP12.51□□□□□ -0.41
BMP4-208ENST00000559642 CDH3P22223 829 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.414e-7■■■■□ 21.2
BMP4-208ENST00000559642 FMO4P31512 558 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 ARL4DP49703 201 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 TMED2Q15363 201 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 GPR19Q15760 415 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 ZNF789Q5FWF6 425 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 ZNF470Q6ECI4 717 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 CENPUQ71F23 418 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 TRIM73Q86UV7 250 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 ADGRF3Q8IZF5 1079 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 LMNTD1Q8N9Z9 388 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
BMP4-208ENST00000559642 OR5K2Q8NHB8 316 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 SNRNP27Q8WVK2 155 aaKnown RBP12.51□□□□□ -0.41
BMP4-208ENST00000559642 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 SIGLEC10Q96LC7 697 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 BIRC8Q96P09 236 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 ACTR10Q9NZ32 417 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 LNPEPQ9UIQ6 1025 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 RUVBL2Q9Y230 463 aaKnown RBP12.51□□□□□ -0.41
BMP4-208ENST00000559642 CRYL1Q9Y2S2 319 aa12.51□□□□□ -0.41
BMP4-208ENST00000559642 LOC101059948A0A1B0GTJ6 334 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 ZCWPW2A0A1B0GU75 182 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 KRT87PA6NCN2 255 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 ZBTB11O95625 1053 aaPredicted RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 FGF5P12034 268 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 ST6GAL1P15907 406 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 PRDX3P30048 256 aaKnown RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 SHMT2P34897 504 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 CYP4F2P78329 520 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 HSD11B2P80365 405 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 DR1Q01658 176 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 DHX9Q08211 1270 aaKnown RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 ABRQ12979 859 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 IL11RAQ14626 422 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 DNAJC21Q5F1R6 531 aaKnown RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 ARMC3Q5W041 872 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 NEPROQ6NW34 567 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 SDCCAG8Q86SQ7 713 aaPredicted RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 TMEM135Q86UB9 458 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 LRRC6Q86X45 466 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 PPP1R3BQ86XI6 285 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 KMT5CQ86Y97 462 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 CILP2Q8IUL8 1156 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 DENND6AQ8IWF6 608 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 TBC1D21Q8IYX1 336 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 GALNT6Q8NCL4 622 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 PWWP2AQ96N64 755 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 PANX3Q96QZ0 392 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
BMP4-208ENST00000559642 SPHK1Q9NYA1 384 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 RARRES3Q9UL19 164 aa12.5□□□□□ -0.41
BMP4-208ENST00000559642 SNRNP200O75643 2136 aaKnown RBP12.49□□□□□ -0.41
BMP4-208ENST00000559642 PIPSLA2A3N6 862 aa12.49□□□□□ -0.41
BMP4-208ENST00000559642 C2orf74A8MZ97 194 aa12.49□□□□□ -0.41
BMP4-208ENST00000559642 MATN2O00339 956 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms