RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 STAMBPL1Q96FJ0 436 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 MED8Q96G25 268 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 NRTNQ99748 197 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 TFB2MQ9H5Q4 396 aaKnown RBP12.23□□□□□ -0.45
LRRC28-214ENST00000559433 XKR8Q9H6D3 395 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 LNPEPQ9UIQ6 1025 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 POMT2Q9UKY4 750 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 RARRES3Q9UL19 164 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 PIEZO2Q9H5I5 2752 aa12.23□□□□□ -0.45
LRRC28-214ENST00000559433 LOC101059948A0A1B0GTJ6 334 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 IQCF5A8MTL0 148 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 GOLGA8MH3BSY2 632 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 BTN3A3O00478 584 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 NDUFS3O75489 264 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 SPAG6O75602 509 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 KIAA0754O94854 1291 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 MT-ND3P03897 115 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 APOA4P06727 396 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 ACADLP28330 430 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 CCR7P32248 378 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 FNTAP49354 379 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 CYP4F2P78329 520 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 ACY1Q03154 408 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 HSPA14Q0VDF9 509 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 MAP7Q14244 749 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 TMED2Q15363 201 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 TBR1Q16650 682 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 CAND1Q86VP6 1230 aaKnown RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 BPHLQ86WA6 291 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 KRT222Q8N1A0 295 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 ZNF843Q8N446 348 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 D2HGDHQ8N465 521 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 GALNT6Q8NCL4 622 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 ASZ1Q8WWH4 475 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 PDLIM2Q96JY6 352 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 PPM1MQ96MI6 270 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 CARD6Q9BX69 1037 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 XAB2Q9HCS7 855 aaKnown RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 FGF21Q9NSA1 209 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 SAMD15Q9P1V8 674 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 POLG2Q9UHN1 485 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 ICKQ9UPZ9 632 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 TDRKHQ9Y2W6 561 aaKnown RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 PCDHB3Q9Y5E6 796 aa12.22□□□□□ -0.45
LRRC28-214ENST00000559433 HEMK1Q9Y5R4 338 aaPredicted RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 FASNP49327 2511 aaKnown RBP12.22□□□□□ -0.45
LRRC28-214ENST00000559433 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 C2orf74A8MZ97 194 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 GOLGA8KD6RF30 607 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 GOLGA8TH3BQL2 631 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 KDM1AO60341 852 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 KATNA1O75449 491 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 SNRNP200O75643 2136 aaKnown RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 MLNP12872 115 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 TCP1P17987 556 aaKnown RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PAMP19021 973 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 ARNTP27540 789 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PRDX3P30048 256 aaKnown RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 SHMT2P34897 504 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 STAT5AP42229 794 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 TUBB4BP68371 445 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 TUBB2AQ13885 445 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PPP1R7Q15435 360 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 GPR19Q15760 415 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 ARMC3Q5W041 872 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 KIAA0930Q6ICG6 404 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PWWP2BQ6NUJ5 590 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 BORAQ6PGQ7 559 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
LRRC28-214ENST00000559433 LRRC6Q86X45 466 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 TBC1D21Q8IYX1 336 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 SLC22A15Q8IZD6 547 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 ADGRF3Q8IZF5 1079 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 MCUQ8NE86 351 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 OR5K2Q8NHB8 316 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 CATSPER2Q96P56 530 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PANX3Q96QZ0 392 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 TUBB2BQ9BVA1 445 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 FAM117AQ9C073 453 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 P2RY12Q9H244 342 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 FANCEQ9HB96 536 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 C1GALT1Q9NS00 363 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PADI1Q9ULC6 663 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 NEU2Q9Y3R4 380 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 RPS6KL1Q9Y6S9 549 aa12.21□□□□□ -0.45
LRRC28-214ENST00000559433 PIPSLA2A3N6 862 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms