RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SLC35E2BP0CK96 405 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 TYRP1P17643 537 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 SPINK2P20155 84 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 MPSTP25325 297 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 ALDH4A1P30038 563 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 ATP5DP30049 168 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 PHBP35232 272 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 HALP42357 657 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 GFERP55789 205 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 NAB1Q13506 487 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 PHKG1Q16816 387 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 AMZ1Q400G9 498 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 MBOAT1Q6ZNC8 495 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 USP53Q70EK8 1073 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 RAB44Q7Z6P3 723 aaPredicted RBP10.6□□□□□ -0.71
TPM1-217ENST00000559108 SLC9B2Q86UD5 537 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CHCHD4Q8N4Q1 142 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 LINC01555Q8NAE3 123 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CFAP61Q8NHU2 1237 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 FLVCR1-AS1Q8TAF5 88 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 EPS8L3Q8TE67 593 aaKnown RBP10.6□□□□□ -0.71
TPM1-217ENST00000559108 ADAMTS14Q8WXS8 1223 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CDKL2Q92772 493 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 NAT6Q93015 286 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CAVIN3Q969G5 261 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 CXorf40BQ96DE9 158 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 LINGO1Q96FE5 620 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 FERD3LQ96RJ6 166 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 LRRN3Q9H3W5 708 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 KIR3DX1Q9H7L2 352 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 EVA1BQ9NVM1 165 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 NSMCE4AQ9NXX6 385 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 TRMT6Q9UJA5 497 aaKnown RBP10.6□□□□□ -0.71
TPM1-217ENST00000559108 CORO1CQ9ULV4 474 aaPredicted RBP10.6□□□□□ -0.71
TPM1-217ENST00000559108 COMMD10Q9Y6G5 202 aa10.6□□□□□ -0.71
TPM1-217ENST00000559108 MED19A0JLT2 244 aaPredicted RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 RHPN2P1A8MT19 583 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 D6RAR5 112 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 AGRPO00253 132 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 CDC7O00311 574 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 PFDN6O15212 129 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 CTIFO43310 598 aaKnown RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 HYAL3O43820 417 aaPredicted RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 PSIP1O75475 530 aaKnown RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 PNLIPP16233 465 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 MAGEA12P43365 314 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 MAPK9P45984 424 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 LSSP48449 732 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 RPIAP49247 311 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 YBX1P67809 324 aaKnown RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 TMED2Q15363 201 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 GRTP1Q5TC63 336 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 MROH9Q5TGP6 573 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 HES3Q5TGS1 186 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 FBXO38Q6PIJ6 1188 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 TRIM48Q8IWZ4 208 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 CENPLQ8N0S6 344 aaPredicted RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 CYP4X1Q8N118 509 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 PLD6Q8N2A8 252 aaKnown RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 OR5K2Q8NHB8 316 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 UBLCP1Q8WVY7 318 aaPredicted RBP10.59□□□□□ -0.71
TPM1-217ENST00000559108 ASB11Q8WXH4 323 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 SLC38A3Q99624 504 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 TSSK1BQ9BXA7 367 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 CCDC68Q9H2F9 335 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 SEMA6CQ9H3T2 930 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 UCK1Q9HA47 277 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 SPHK1Q9NYA1 384 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 KCNK4Q9NYG8 393 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 TAS2R13Q9NYV9 303 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 NCKIPSDQ9NZQ3 722 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 KLHL42Q9P2K6 505 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 ASF1AQ9Y294 204 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
TPM1-217ENST00000559108 EXOC1LA0A1B0GW35 172 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 NPEPPSL1A6NEC2 478 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 GFYI3L273 518 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 IFRD1O00458 451 aaPredicted RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 BTN3A1O00481 513 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 KPNA5O15131 536 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 KIF1CO43896 1103 aaKnown RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 MPC1LP0DKB6 136 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SLC2A4P14672 509 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SDHBP21912 280 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 PKLRP30613 574 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SPRP35270 261 aaPredicted RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 GPR3P46089 330 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SLCO1A2P46721 670 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 KCNC1P48547 511 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 DUSP3P51452 185 aaPredicted RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 TUBB4BP68371 445 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 POU4F1Q01851 419 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 ILKQ13418 452 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 FASTKQ14296 549 aaKnown RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 USP10Q14694 798 aaKnown RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 PPP1R3AQ16821 1122 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 EMBQ6PCB8 327 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms