RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TFR2Q9UP52 801 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PPIL1Q9Y3C6 166 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 ZNF711Q9Y462 761 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 AHCTF1Q8WYP5 2266 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 C3orf70A6NLC5 250 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 ANKRD66B4E2M5 251 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 GRID2O43424 1007 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 BUD23O43709 281 aaKnown RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 DUX1O43812 170 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 SLC28A2O43868 658 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 CST8O60676 142 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 DNAJC6O75061 913 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 MTA2O94776 668 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 FGF3P11487 239 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 PECAM1P16284 738 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 ZNF8P17098 575 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 TYRP1P17643 537 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 WT1P19544 449 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 PTMSP20962 102 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 PBLDP30039 288 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 HNRNPH3P31942 346 aaKnown RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 TNNT3P45378 269 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 GPR3P46089 330 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 LIMK2P53671 638 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 RPL26P61254 145 aaKnown RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 IFI35P80217 286 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 NOMO1Q15155 1222 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 ASTE1Q2TB18 679 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 HENMT1Q5T8I9 393 aaKnown RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 ANKS6Q68DC2 871 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 MFSD7Q6UXD7 560 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 SLC9B2Q86UD5 537 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 C17orf82Q86X59 251 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 RELL1Q8IUW5 271 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 VSTM4Q8IW00 320 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 RHOT2Q8IXI1 618 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 RHOT1Q8IXI2 618 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 SFRP1Q8N474 314 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 TTC30BQ8N4P2 665 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 GPR26Q8NDV2 337 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 OR4D9Q8NGE8 314 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 GATAD2BQ8WXI9 593 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 SGF29Q96ES7 293 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 COX14Q96I36 57 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 TAAR9Q96RI9 348 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 WDR24Q96S15 920 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 TBC1D10AQ9BXI6 508 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 TRIM4Q9C037 500 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 OCIAD1Q9NX40 245 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 VPS18Q9P253 973 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 KLHL8Q9P2G9 620 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 ATXN10Q9UBB4 475 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 AMACRQ9UHK6 382 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 LCMT1Q9UIC8 334 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 RPL26L1Q9UNX3 145 aaKnown RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 HEMK1Q9Y5R4 338 aaPredicted RBP7.22□□□□□ -1.25
SPG11-213ENST00000558988 B3GALT1Q9Y5Z6 326 aa7.22□□□□□ -1.25
SPG11-213ENST00000558988 ITPR1Q14643 2758 aa7.21□□□□□ -1.25
SPG11-213ENST00000558988 ZFHX4Q86UP3 3567 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 SDK2Q58EX2 2172 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 A0A0A6YYK5 440 aaPredicted RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 AKR1B15C9JRZ8 316 aaPredicted RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 STMND1H3BQB6 276 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 J3QKU1 62 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 HGSO14964 777 aaPredicted RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 AURKAO14965 403 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 GPR39O43194 453 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 RASSF9O75901 435 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 PRKAR1AP10644 381 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 THRAP10827 490 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 F3P13726 295 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 ZFXP17010 805 aaPredicted RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 PTPN3P26045 913 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 ARHGAP25P42331 645 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 MARCKSL1P49006 195 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 SEPHS1P49903 392 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 DRG2P55039 364 aaKnown RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 CDK18Q07002 472 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 FOXM1Q08050 763 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 SLC9A5Q14940 896 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 SLC9A4Q6AI14 798 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 IYDQ6PHW0 289 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 FAM151BQ6UXP7 276 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 TRAPPC5Q8IUR0 188 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 CNGA4Q8IV77 575 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 UNC5BQ8IZJ1 945 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 LSM14AQ8ND56 463 aaKnown RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 IPMKQ8NFU5 416 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 BLOC1S5Q8TDH9 187 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 TFB1MQ8WVM0 346 aaKnown RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 EID2BQ96D98 161 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 IMP4Q96G21 291 aaKnown RBP7.21□□□□□ -1.26
SPG11-213ENST00000558988 MED8Q96G25 268 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 ELMO2Q96JJ3 720 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 HEMGNQ9BXL5 484 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 TRIM5Q9C035 493 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 C10orf88Q9H8K7 445 aa7.21□□□□□ -1.26
SPG11-213ENST00000558988 GLOD4Q9HC38 313 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms