RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 TLK1Q9UKI8 766 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TDRKHQ9Y2W6 561 aaKnown RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 COL5A1P20908 1838 aaPredicted RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 RASGRF2O14827 1237 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TCEA3O75764 348 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 ACP1P24666 158 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 ALDH4A1P30038 563 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 NOVA1P51513 510 aaKnown RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 GPR18Q14330 331 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 PLCL1Q15111 1095 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TAF1BQ53T94 588 aaPredicted RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 TTC23LQ6PF05 361 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TMEM26Q6ZUK4 368 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TBC1D21Q8IYX1 336 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 OR5K2Q8NHB8 316 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 ANKRD49Q8WVL7 239 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 JPH3Q8WXH2 748 aaPredicted RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 MTBPQ96DY7 904 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 RTKNQ9BST9 563 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 KIR3DX1Q9H7L2 352 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 SPAARA0A1B0GVQ0 90 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 MATN4O95460 622 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 TSPAN12O95859 305 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 CATP04040 527 aaKnown RBP20.71■□□□□ 0.91
CASC4-204ENST00000557945 ALDOAP04075 364 aaKnown RBP20.71■□□□□ 0.91
CASC4-204ENST00000557945 SLC35E2BP0CK96 405 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 CCDC166P0CW27 439 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 MAPK9P45984 424 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 BDKRB1P46663 353 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 ACADVLP49748 655 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 TBC1D1Q86TI0 1168 aaPredicted RBP20.71■□□□□ 0.91
CASC4-204ENST00000557945 TDRPQ86YL5 185 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 SPATA6LQ8N4H0 392 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 ZFPM2Q8WW38 1151 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 CCDC3Q9BQI4 270 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 VPS11Q9H270 941 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 KCNK4Q9NYG8 393 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 POLG2Q9UHN1 485 aa20.71■□□□□ 0.91
CASC4-204ENST00000557945 A0A096LPK6 155 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 GIPC1O14908 333 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 CDH16O75309 829 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 WISP3O95389 354 aaPredicted RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 C1orf105O95561 183 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 C2P06681 752 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 CEACAM1P13688 526 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 PNLIPP16233 465 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 KCNA4P22459 653 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 MAP4P27816 1152 aaKnown RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 GMPRP36959 345 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 OR1D5P58170 312 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 CSHL1Q14406 222 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 PPM1JQ5JR12 505 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 UBE2R2Q712K3 238 aaPredicted RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 ZNF438Q7Z4V0 828 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 GLRX5Q86SX6 157 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 DCUN1D3Q8IWE4 304 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 ASB11Q8WXH4 323 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 TBC1D10AQ9BXI6 508 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 ROPN1BQ9BZX4 212 aaPredicted RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 UNKQ9C0B0 810 aaKnown RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 SYNDIG1Q9H7V2 258 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 UCK1Q9HA47 277 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 ROPN1Q9HAT0 212 aaPredicted RBP20.7■□□□□ 0.9
CASC4-204ENST00000557945 CIDEBQ9UHD4 219 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 ACOT9Q9Y305 439 aa20.7■□□□□ 0.9
CASC4-204ENST00000557945 A0A087X1B8 175 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 UQCRHLA0A096LP55 91 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 DCDC2BA2VCK2 349 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 ZW10O43264 779 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 PSIP1O75475 530 aaKnown RBP20.69■□□□□ 0.9
CASC4-204ENST00000557945 UQCRHP07919 91 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 KRT15P19012 456 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 CCNFP41002 786 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 GPR3P46089 330 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 SIM1P81133 766 aaPredicted RBP20.69■□□□□ 0.9
CASC4-204ENST00000557945 AMZ1Q400G9 498 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 CNPY4Q8N129 248 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 OR52E1Q8NGJ3 308 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 MAGEC3Q8TD91 643 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 LCN9Q8WX39 176 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 PDLIM5Q96HC4 596 aaKnown RBP20.69■□□□□ 0.9
CASC4-204ENST00000557945 ABCG4Q9H172 646 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 PLAGL1Q9UM63 463 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 PCNX2A6NKB5 2137 aa20.69■□□□□ 0.9
CASC4-204ENST00000557945 LILRA5A6NI73 299 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 ARHGEF33A8MVX0 844 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 BTN3A1O00481 513 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 ZBTB14O43829 449 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 KDM1AO60341 852 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 RFPL3O75679 317 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 MT-ND3P03897 115 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 MPOP05164 745 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 GP1BAP07359 652 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 C8GP07360 202 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 H2AFXP16104 143 aaPredicted RBP20.68■□□□□ 0.9
CASC4-204ENST00000557945 NR1D2Q14995 579 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 RASA2Q15283 850 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 TIFABQ6ZNK6 161 aa20.68■□□□□ 0.9
CASC4-204ENST00000557945 SPRED1Q7Z699 444 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms