RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PRSS56P0CW18 603 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 ACRV1P26436 265 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 CTNNA1P35221 906 aaKnown RBP15.44■□□□□ 0.06
SCFD1-224ENST00000557713 PTPN7P35236 360 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 RRADP55042 308 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 PRKG2Q13237 762 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 ATP1A4Q13733 1029 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 SLC6A19Q695T7 634 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 DARS2Q6PI48 645 aaKnown RBP15.44■□□□□ 0.06
SCFD1-224ENST00000557713 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 CLDN19Q8N6F1 224 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 CCDC110Q8TBZ0 833 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 TFGQ92734 400 aaPredicted RBP15.44■□□□□ 0.06
SCFD1-224ENST00000557713 PNPLA2Q96AD5 504 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 SPATA13Q96N96 652 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 FAM118BQ9BPY3 351 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 OSBPL8Q9BZF1 889 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 XKR8Q9H6D3 395 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 FAM60AQ9NP50 221 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
SCFD1-224ENST00000557713 ACTR10Q9NZ32 417 aa15.44■□□□□ 0.06
SCFD1-224ENST00000557713 PJA2O43164 708 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 STK10O94804 968 aaKnown RBP15.43■□□□□ 0.06
SCFD1-224ENST00000557713 GSTM1P09488 218 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 RNF224P0DH78 156 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 AGXTP21549 392 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 GABRA4P48169 554 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 GSTM4Q03013 218 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 EIF2S3LQ2VIR3 472 aaKnown RBP15.43■□□□□ 0.06
SCFD1-224ENST00000557713 ZRANB3Q5FWF4 1079 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 ZNF449Q6P9G9 518 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 SPESP1Q6UW49 350 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 RAB43Q86YS6 212 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 DNAJC1Q96KC8 554 aaKnown RBP15.43■□□□□ 0.06
SCFD1-224ENST00000557713 PPP1R2P1Q96PQ5 205 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 DHRS4Q9BTZ2 278 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 SLC7A5P2Q9GIP4 190 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 VPS37BQ9H9H4 285 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 SLAMF7Q9NQ25 335 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 NLE1Q9NVX2 485 aaPredicted RBP15.43■□□□□ 0.06
SCFD1-224ENST00000557713 GPR83Q9NYM4 423 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 LUZP4Q9P127 313 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 C5AR2Q9P296 337 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 G3BP2Q9UN86 482 aaKnown RBP15.43■□□□□ 0.06
SCFD1-224ENST00000557713 ICKQ9UPZ9 632 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 SHANK1Q9Y566 2161 aa15.43■□□□□ 0.06
SCFD1-224ENST00000557713 HCRTR1O43613 425 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 TPBGLP0DKB5 382 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 CBSLP0DN79 551 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 PTMSP20962 102 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 VARSP26640 1264 aaKnown RBP15.42■□□□□ 0.06
SCFD1-224ENST00000557713 CBSP35520 551 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 MRPL49Q13405 166 aaKnown RBP15.42■□□□□ 0.06
SCFD1-224ENST00000557713 ZIC1Q15915 447 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 KCTD11Q693B1 232 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 UNC5AQ6ZN44 842 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 TAS2R42Q7RTR8 314 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 PIANPQ8IYJ0 282 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 FLVCR1-AS1Q8TAF5 88 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 TCTN2Q96GX1 697 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 CDKN2AIPNLQ96HQ2 116 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 SGSM3Q96HU1 749 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 HGH1Q9BTY7 390 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 CHRNA10Q9GZZ6 450 aa15.42■□□□□ 0.06
SCFD1-224ENST00000557713 SPRTNQ9H040 489 aaPredicted RBP15.42■□□□□ 0.06
SCFD1-224ENST00000557713 SPTAN1Q13813 2472 aaKnown RBP15.42■□□□□ 0.06
SCFD1-224ENST00000557713 SPTBP11277 2137 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 MACROD2A1Z1Q3 448 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 C9J4A7 227 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 AP2A2O94973 939 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 TPH1P17752 444 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 CTNNA2P26232 953 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 ACADLP28330 430 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 RAPSNQ13702 412 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 SSPNQ14714 243 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 SPA17Q15506 151 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 DBN1Q16643 649 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 PLEKHN1Q494U1 663 aaPredicted RBP15.41■□□□□ 0.06
SCFD1-224ENST00000557713 RHBDD2Q6NTF9 364 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 AADACL2Q6P093 401 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 TRIM73Q86UV7 250 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 GPR135Q8IZ08 494 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 C19orf47Q8N9M1 422 aaKnown RBP15.41■□□□□ 0.06
SCFD1-224ENST00000557713 RNF214Q8ND24 703 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 OR5AR1Q8NGP9 310 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCFD1-224ENST00000557713 C19orf60Q96EN9 201 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 IP6K3Q96PC2 410 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 OR2A14Q96R47 310 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 TSPY26PQ9H489 355 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 PADI2Q9Y2J8 665 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 PRSS21Q9Y6M0 314 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 AP1M2Q9Y6Q5 423 aa15.41■□□□□ 0.06
SCFD1-224ENST00000557713 UNC79Q9P2D8 2635 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 RCCD1A6NED2 376 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 LIN7AO14910 233 aaPredicted RBP15.4■□□□□ 0.06
SCFD1-224ENST00000557713 OR2B3O76000 313 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 METTL18O95568 372 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 DDAH2O95865 285 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms