RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PDZD3Q86UT5 571 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 TBC1D21Q8IYX1 336 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 RCBTB1Q8NDN9 531 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 GPR150Q8NGU9 434 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 KIF18AQ8NI77 898 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 MAGEC3Q8TD91 643 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 RMDN2Q96LZ7 410 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SLC46A1Q96NT5 459 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CD180Q99467 661 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 EBNA1BP2Q99848 306 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 ERP44Q9BS26 406 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 ASPSCR1Q9BZE9 553 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SEMA6CQ9H3T2 930 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 KIR3DX1Q9H7L2 352 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 HRASLS2Q9NWW9 162 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SLC39A1Q9NY26 324 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 ZC3H7BQ9UGR2 993 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SLC24A2Q9UI40 661 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 CDC23Q9UJX2 597 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 TDRKHQ9Y2W6 561 aaKnown RBP8.12□□□□□ -1.11
PSEN1-223ENST00000557511 SNX24Q9Y343 169 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 COMMD10Q9Y6G5 202 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 PRSS21Q9Y6M0 314 aa8.12□□□□□ -1.11
PSEN1-223ENST00000557511 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 GSAPA4D1B5 854 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 OR6C74A6NCV1 312 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 SGTAO43765 313 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PKMP14618 531 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CD82P27701 267 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 SHMT2P34897 504 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 MAGEA3P43357 314 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 ABCG1P45844 678 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PDX1P52945 283 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 ADARP55265 1226 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 FOXM1Q08050 763 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 ILF2Q12905 390 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 SEMA3AQ14563 771 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 TYSND1Q2T9J0 566 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 TMTC4Q5T4D3 741 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 DCAF12Q5T6F0 453 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 DUS1LQ6P1R4 473 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CEACAM20Q6UY09 585 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 KCNMB4Q86W47 210 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PALM2Q8IXS6 379 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 DEPDC4Q8N2C3 294 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CFAP61Q8NHU2 1237 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 KCNE4Q8WWG9 221 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 UBXN4Q92575 508 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CDKL2Q92772 493 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CFAP36Q96G28 342 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 SIGLEC10Q96LC7 697 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 C9orf72Q96LT7 481 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 TEFMQ96QE5 360 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 ZPBPQ9BS86 351 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 HGH1Q9BTY7 390 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 RAB33BQ9H082 229 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 OR52A5Q9H2C5 316 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 DPH5Q9H2P9 285 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 IARS2Q9NSE4 1012 aaKnown RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 WHRNQ9P202 907 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 MARCH4Q9P2E8 410 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 EPHA6Q9UF33 1036 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 FBXO5Q9UKT4 447 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CHMP2BQ9UQN3 213 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 CRYL1Q9Y2S2 319 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 RAXQ9Y2V3 346 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 PCDHGA7Q9Y5G6 932 aa8.11□□□□□ -1.11
PSEN1-223ENST00000557511 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-223ENST00000557511 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
PSEN1-223ENST00000557511 MN1Q10571 1320 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-223ENST00000557511 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 ZCWPW2A0A1B0GU75 182 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 SLC5A10A0PJK1 596 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 CTAGE15A4D2H0 777 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 OR5K3A6NET4 321 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 IQCF5A8MTL0 148 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 C2orf74A8MZ97 194 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 B4E171 279 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 POLR1CO15160 346 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-223ENST00000557511 NVLO15381 856 aaKnown RBP8.1□□□□□ -1.11
PSEN1-223ENST00000557511 RAD51CO43502 376 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 VPS26AO75436 327 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 CTAGE8P0CG41 777 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 HGFP14210 728 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 POLR2CP19387 275 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-223ENST00000557511 CDH3P22223 829 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 AOAHP28039 575 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 PDHA2P29803 388 aa8.1□□□□□ -1.11
PSEN1-223ENST00000557511 CCR7P32248 378 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms