RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 DLGAP4Q9Y2H0 992 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 YIPF1Q9Y548 306 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 LRATO95237 230 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 CST1P01037 141 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 MYBPC3Q14896 1274 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 MEP1AQ16819 746 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SPATS1Q496A3 300 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 CCNYL2Q5T2Q4 361 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SULT1C3Q6IMI6 304 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SPESP1Q6UW49 350 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 TPGS1Q6ZTW0 290 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 DEFB128Q7Z7B8 93 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 TMEM150AQ86TG1 271 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 BPIFB6Q8NFQ5 453 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SLC22A17Q8WUG5 538 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 NCLNQ969V3 563 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PYCR2Q96C36 320 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ALG14Q96F25 216 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 OSBPL6Q9BZF3 934 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 CD244Q9BZW8 370 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 MAGEE1Q9HCI5 957 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 AASSQ9UDR5 926 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 AOC2O75106 756 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ULK1O75385 1050 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PGRP06401 933 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF182P17025 639 aaPredicted RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 AGXTP21549 392 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ELAVL2Q12926 359 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ZXDCQ2QGD7 858 aaPredicted RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 DUS1LQ6P1R4 473 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ZBTB2Q8N680 514 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 CD99L2Q8TCZ2 262 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 FAM162AQ96A26 154 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PDLIM5Q96HC4 596 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 INPP5KQ9BT40 448 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 AMBRA1Q9C0C7 1298 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 OARD1Q9Y530 152 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PCDHB1Q9Y5F3 818 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PCDHGA8Q9Y5G5 932 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 GLUD1P00367 558 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ALDH7A1P49419 539 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SMARCB1Q12824 385 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 LHX8Q68G74 356 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 FAM117BQ6P1L5 589 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 DET1Q7L5Y6 550 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 GALNT10Q86SR1 603 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 RBFAQ8N0V3 343 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 FRS2Q8WU20 508 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 C2orf15Q8WU43 125 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 TANKQ92844 425 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ULK4Q96C45 1275 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 THAP11Q96EK4 314 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 SLC47A1Q96FL8 570 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 PPP3R2Q96LZ3 170 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 TSSK3Q96PN8 268 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 OR52E6Q96RD3 313 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ELAC1Q9H777 363 aaKnown RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF334Q9HCZ1 680 aaPredicted RBP17.35■□□□□ 0.37
XRCC3-218ENST00000557439 INVSQ9Y283 1065 aa17.35■□□□□ 0.37
XRCC3-218ENST00000557439 MYOFQ9NZM1 2061 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 G3V2T6 193 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GNGT2O14610 69 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 MYCLP1P12525 358 aaPredicted RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 TACR1P25103 407 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 STK19P49842 368 aaPredicted RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 HLCSP50747 726 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 R3HCC1LQ7Z5L2 792 aaKnown RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 RBM23Q86U06 439 aaKnown RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 ZC3H7AQ8IWR0 971 aaKnown RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GPR26Q8NDV2 337 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 MBOAT4Q96T53 435 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 LRTM1Q9HBL6 345 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GNPTGQ9UJJ9 305 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 EIF3LQ9Y262 564 aaKnown RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GLYATL1P3A0A0U1RQE8 302 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 NPIPB15A6NHN6 443 aaPredicted RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 CXCR6O00574 342 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 AXIN1O15169 862 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 RGS14O43566 566 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GMNNO75496 209 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 NPPAP01160 153 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 TRBC1P01850 177 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 C7P10643 843 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 ACRV1P26436 265 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 DCKP27707 260 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 RGS4P49798 205 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 NUP107P57740 925 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 SP3Q02447 781 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 CTU2Q2VPK5 515 aaKnown RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 GPRC6AQ5T6X5 926 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 SNX20Q7Z614 316 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 ZDHHC13Q8IUH4 622 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 SKA2Q8WVK7 121 aaPredicted RBP17.34■□□□□ 0.37
XRCC3-218ENST00000557439 EGLN2Q96KS0 407 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 ZBTB18Q99592 522 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 ACTR8Q9H981 624 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 FAM8A1Q9UBU6 413 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 PCDHB14Q9Y5E9 798 aa17.34■□□□□ 0.37
XRCC3-218ENST00000557439 CPQQ9Y646 472 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms