RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TSEN15Q8WW01 171 aaKnown RBP8.23□□□□□ -1.09
CHD8-213ENST00000557364 PDCD10Q9BUL8 212 aa8.23□□□□□ -1.09
CHD8-213ENST00000557364 TMEM184CQ9NVA4 438 aa8.23□□□□□ -1.09
CHD8-213ENST00000557364 SETD1AO15047 1707 aaKnown RBP8.23□□□□□ -1.09
CHD8-213ENST00000557364 CITO14578 2027 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 K7EPI3 171 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 NFKBIEO00221 500 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 FABP3P05413 133 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 C2P06681 752 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 MAT2AP31153 395 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 ZNF792Q3KQV3 632 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PRAMEF14Q5SWL7 426 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PRAMEF13Q5VWM6 474 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SPESP1Q6UW49 350 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 BNIPLQ7Z465 357 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ZC3HC1Q86WB0 502 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 DCUN1D3Q8IWE4 304 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ZSCAN4Q8NAM6 433 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 OR2AG1Q9H205 316 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ARMCX1Q9P291 453 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 IGLV3-22A0A075B6J6 115 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 A0A0X1KG70 313 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GSC2O15499 205 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 LILRB3O75022 631 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GPIP06744 558 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CYP4F2P78329 520 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CLCQ05315 142 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 BST1Q10588 318 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ZSWIM7Q19AV6 140 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ALKBH2Q6NS38 261 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SIX5Q8N196 739 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CADM2Q8N3J6 435 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ZBTB10Q96DT7 871 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SCLYQ96I15 445 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 Q9N2J8 555 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 TMEM138Q9NPI0 162 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SPATA7Q9P0W8 599 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 FCF1Q9Y324 198 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 BAZ2AQ9UIF9 1905 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 ELOA3DA6NLF2 546 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 SCGB2A1O75556 95 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SLC10A3P09131 477 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PER3P56645 1201 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ELOA3BQ3SY89 546 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ARSIQ5FYB1 569 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ELOA3Q8NG57 546 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 B3GNT5Q9BYG0 378 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 NUMA1Q14980 2115 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 MAGEB17A8MXT2 336 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 DUX1O43812 170 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GOT2P00505 430 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 EPOP01588 193 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 BPGMP07738 259 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CASP9P55211 416 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CYP4F8P98187 520 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SERINC3Q13530 473 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 MYLK3Q32MK0 819 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CDCA2Q69YH5 1023 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 C16orf46Q6P387 395 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 MMAAQ8IVH4 418 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 RASGEF1CQ8N431 466 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CHCHD4Q8N4Q1 142 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 HORMAD2Q8N7B1 307 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 TWIST2Q8WVJ9 160 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 TESCQ96BS2 214 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 AGAP2Q99490 1192 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SLC29A3Q9BZD2 475 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 SDCBP2Q9H190 292 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 NOL11Q9H8H0 719 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 TMPRSS11EQ9UL52 423 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 CCDC182A6NF36 153 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ANKRD65E5RJM6 399 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 DLDP09622 509 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 CXCR1P25024 350 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GRIA2P42262 883 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GSSP48637 474 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 ENPP2Q13822 863 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 KLHL22Q53GT1 634 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 GPR151Q8TDV0 419 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PEX13Q92968 403 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 RMI1Q9H9A7 625 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PTPRHQ9HD43 1115 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 POLR3BQ9NW08 1133 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 PRODH2Q9UF12 536 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 BTRCQ9Y297 605 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 B4DGG1 531 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PRPS1L1P21108 318 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PSMA1P25786 263 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 SNAPC1Q16533 368 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 LINGO4Q6UY18 593 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 ILDR1Q86SU0 546 aaPredicted RBP8.22□□□□□ -1.09
CHD8-213ENST00000557364 POU5F2Q8N7G0 328 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PDPRQ8NCN5 879 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 PSMA8Q8TAA3 256 aa8.22□□□□□ -1.09
CHD8-213ENST00000557364 FATE1Q969F0 183 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms