RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 TMEM150CB9EJG8 249 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 BTN3A3O00478 584 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 LIASO43766 372 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 CYP2A7P20853 494 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 PSMA3P25788 255 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 CDC25BP30305 580 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 STIP1P31948 543 aaKnown RBP13.74□□□□□ -0.21
SNX6-210ENST00000557341 FOXN2P32314 431 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 SHMT2P34897 504 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 FDFT1P37268 417 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 LMAN1P49257 510 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 PRKG2Q13237 762 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 SEMA5AQ13591 1074 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 IL10RAQ13651 578 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 LAMB3Q13751 1172 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 CCDC38Q502W7 563 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 AFTPHQ6ULP2 937 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 DSELQ8IZU8 1212 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 RNF10Q8N5U6 811 aaKnown RBP13.74□□□□□ -0.21
SNX6-210ENST00000557341 PHC3Q8NDX5 983 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 ELMO1Q92556 727 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 TLK1Q9UKI8 766 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 ICKQ9UPZ9 632 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
SNX6-210ENST00000557341 ASF1AQ9Y294 204 aa13.74□□□□□ -0.21
SNX6-210ENST00000557341 MAST4O15021 2626 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 CCDC162PA2VCL2 907 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 E7EVH7 732 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 F8W8V4 182 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 MEN1O00255 615 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OR56A5P0C7T3 313 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 RORAP35398 523 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 FOXK1P85037 733 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OASLQ15646 514 aaKnown RBP13.73□□□□□ -0.21
SNX6-210ENST00000557341 ZNF789Q5FWF6 425 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 PRAMEF17Q5VTA0 474 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 SPESP1Q6UW49 350 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 PPP1R21Q6ZMI0 780 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 ASB18Q6ZVZ8 466 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 HOOK3Q86VS8 718 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 SYTL1Q8IYJ3 562 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 ADGRF3Q8IZF5 1079 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 TEX19Q8NA77 164 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 SLC38A9Q8NBW4 561 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OR5AR1Q8NGP9 310 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OR13J1Q8NGT2 312 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 TRAPPC9Q96Q05 1148 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 TTC1Q99614 292 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 TRIM55Q9BYV6 548 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 SLC7A5P2Q9GIP4 190 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 XKR8Q9H6D3 395 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
SNX6-210ENST00000557341 SNX7Q9UNH6 387 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 PRSS21Q9Y6M0 314 aa13.73□□□□□ -0.21
SNX6-210ENST00000557341 KRT86O43790 486 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 KDM1AO60341 852 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 DNAJB5O75953 348 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 SUN1O94901 812 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 IFNB1P01574 187 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 RAB40ALP0C0E4 278 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 PVRP15151 417 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 ITGA1P56199 1179 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 PLOD1Q02809 727 aaPredicted RBP13.72□□□□□ -0.21
SNX6-210ENST00000557341 BRD3Q15059 726 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 CPZQ66K79 652 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 SLC13A5Q86YT5 568 aaPredicted RBP13.72□□□□□ -0.21
SNX6-210ENST00000557341 TBC1D21Q8IYX1 336 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
SNX6-210ENST00000557341 C19orf47Q8N9M1 422 aaKnown RBP13.72□□□□□ -0.21
SNX6-210ENST00000557341 OR5K2Q8NHB8 316 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 UBE2Q2Q8WVN8 375 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 N4BP2L2Q92802 583 aaPredicted RBP13.72□□□□□ -0.21
SNX6-210ENST00000557341 RANBP9Q96S59 729 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 NRTNQ99748 197 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 ETNK1Q9HBU6 452 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 ACSS2Q9NR19 701 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 PCMTD2Q9NV79 361 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 POLG2Q9UHN1 485 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 ZNF148Q9UQR1 794 aa13.72□□□□□ -0.21
SNX6-210ENST00000557341 SLC5A10A0PJK1 596 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 E7EQ34 232 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 K7EM74 188 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 GOT2P00505 430 aaKnown RBP13.71□□□□□ -0.21
SNX6-210ENST00000557341 HBQ1P09105 142 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 UGT2B7P16662 529 aa13.71□□□□□ -0.21
SNX6-210ENST00000557341 ADRA1DP25100 572 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms