RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 GABRB3P28472 473 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 SSTR1P30872 391 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CLCN7P51798 805 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 GFERP55789 205 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 ABRQ12979 859 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 PRKG2Q13237 762 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 GBX1Q14549 363 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 C16orf72Q14CZ0 275 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 ARMC6Q6NXE6 501 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 FOXR1Q6PIV2 292 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 UNC5DQ6UXZ4 953 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 LSMEM2Q8N112 164 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 FBXO39Q8N4B4 442 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 SIDT2Q8NBJ9 832 aaKnown RBP13.22□□□□□ -0.29
SHMT2-228ENST00000557302 RCBTB1Q8NDN9 531 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 OR4E2Q8NGC2 313 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 OR52E1Q8NGJ3 308 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 ZDHHC12Q96GR4 267 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 FOPNLQ96NB1 174 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 GPR21Q99679 349 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CMKLR1Q99788 373 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 SRMSQ9H3Y6 488 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 TFB2MQ9H5Q4 396 aaKnown RBP13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
SHMT2-228ENST00000557302 HRASLS2Q9NWW9 162 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 NSMCE4AQ9NXX6 385 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 KLHL42Q9P2K6 505 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 GALPQ9UBC7 116 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 EPHA6Q9UF33 1036 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
SHMT2-228ENST00000557302 LOXL2Q9Y4K0 774 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 CACNA1BQ00975 2339 aa13.22□□□□□ -0.29
SHMT2-228ENST00000557302 A0A1W2PNU3 283 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 OR6C74A6NCV1 312 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 TMEM8BA6NDV4 472 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 OR5K3A6NET4 321 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 A8MU76 341 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 ESPNB1AK53 854 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 AGRPO00253 132 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 BRINP1O60477 761 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 C9P02748 559 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 CSTF2P33240 577 aaKnown RBP eCLIP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 ABCG1P45844 678 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 UGT3A1Q6NUS8 523 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 C3orf62Q6ZUJ4 267 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 CYS1Q717R9 158 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 ARHGAP22Q7Z5H3 698 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 DCUN1D3Q8IWE4 304 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 GPATCH11Q8N954 259 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 AGBL5Q8NDL9 886 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 CDKL2Q92772 493 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 INPP5DQ92835 1189 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 NDNQ99608 321 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 RAB33BQ9H082 229 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 TSPYL1Q9H0U9 437 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 TRMT6Q9UJA5 497 aaKnown RBP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-228ENST00000557302 MED16Q9Y2X0 877 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 DHRS7Q9Y394 339 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 PCDHGA8Q9Y5G5 932 aa13.21□□□□□ -0.29
SHMT2-228ENST00000557302 MAP1BP46821 2468 aaKnown RBP13.2□□□□□ -0.3
SHMT2-228ENST00000557302 PMS2P1A4D2B8 440 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 MATN2O00339 956 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 TOX3O15405 576 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-228ENST00000557302 SPAG6O75602 509 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 RASSF9O75901 435 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 ANKRD34CP0C6C1 535 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 JMJD7P0C870 316 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 HGFP14210 728 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 STX2P32856 288 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 SHMT2P34897 504 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 SKIV2L2P42285 1042 aaKnown RBP13.2□□□□□ -0.3
SHMT2-228ENST00000557302 GPX6P59796 221 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 CUL1Q13616 776 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 ACSBG2Q5FVE4 666 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 RBM20Q5T481 1227 aaKnown RBP13.2□□□□□ -0.3
SHMT2-228ENST00000557302 TTC23LQ6PF05 361 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 FAM92BQ6ZTR7 304 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 PRSS42Q7Z5A4 293 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 STRA8Q7Z7C7 330 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 AMIGO1Q86WK6 493 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 IFT20Q8IY31 132 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 GIMAP7Q8NHV1 300 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 CD200R1Q8TD46 325 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 CD180Q99467 661 aa13.2□□□□□ -0.3
SHMT2-228ENST00000557302 FMO2Q99518 471 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms