RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC22A10Q63ZE4 541 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CEP97Q8IW35 865 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SP8Q8IXZ3 490 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 LRRC57Q8N9N7 239 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SPATA20Q8TB22 786 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ARL11Q969Q4 196 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MMP27Q9H306 513 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 LRRC19Q9H756 370 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MAGEB17A8MXT2 336 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SSX5O60225 188 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PIP5K1CO60331 668 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CREBL2O60519 120 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 LARGE1O95461 756 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PSEN2P49810 448 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 NDST1P52848 882 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ASCC1Q8N9N2 400 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 OR56B2PQ8NGI1 322 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF419Q96HQ0 510 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 TLR10Q9BXR5 811 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 NINJ2Q9NZG7 142 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SLC7A8Q9UHI5 535 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SCGB1D2O95969 90 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ART1P52961 327 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 FCGRTP55899 365 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 C2orf80Q0P641 193 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 KLHL6Q8WZ60 621 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 OVCA2Q8WZ82 227 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 BRINP2Q9C0B6 783 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 THPOP40225 353 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 LCP2Q13094 533 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PDZD9Q8IXQ8 264 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MAPK15Q8TD08 544 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CHIAQ9BZP6 476 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 C21orf2O43822 256 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SOX30O94993 753 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PAK4O96013 591 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 NPPAP01160 153 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ITPKAP23677 461 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 GTF2A2P52657 109 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 HMGCS2P54868 508 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 DHCR24Q15392 516 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PDSS1Q5T2R2 415 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CES5AQ6NT32 575 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CLNKQ7Z7G1 428 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 GPR65Q8IYL9 337 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ANKRD52Q8NB46 1076 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SLC41A3Q96GZ6 507 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SDHAF2Q9NX18 166 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNHIT2Q9UHR6 403 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 RBMX2Q9Y388 322 aaKnown RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF521Q96K83 1311 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ALLCQ8N6M5 410 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SLC37A3Q8NCC5 494 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 AURKBQ96GD4 344 aaPredicted RBP8.7□□□□□ -1.02
SYNE3-205ENST00000557275 TREHO43280 583 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MT-CO1P00395 513 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 BCKDHAP12694 445 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ETFAP13804 333 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF81P51508 661 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 SLC5A3P53794 718 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF676Q8N7Q3 588 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 MFSD1Q9H3U5 465 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 OR12D3Q9UGF7 316 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 PLEKHM1Q9Y4G2 1056 aa8.7□□□□□ -1.02
SYNE3-205ENST00000557275 A8MVJ9 347 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 DNM1LO00429 736 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 RCBTB2O95199 551 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 AZGP1P25311 298 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SLC25A3Q00325 362 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 FAAP100Q0VG06 881 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF773Q6PK81 442 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 KCTD8Q6ZWB6 473 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TRMT2AQ8IZ69 625 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 NKD1Q969G9 470 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 MRI1Q9BV20 369 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 NUSAP1Q9BXS6 441 aaKnown RBP8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SGK2Q9HBY8 427 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 FBXL21Q9UKT6 434 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CEP152O94986 1710 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 A0A1W2PRQ8 180 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 UCHL1P09936 223 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ELFN1P0C7U0 828 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF35P13682 527 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CAP2P40123 477 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CXCR3P49682 368 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 KCNIP4Q6PIL6 250 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SUN3Q8TAQ9 357 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 GRIN3AQ8TCU5 1115 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM45AQ9NWC5 275 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 SNCAIPQ9Y6H5 919 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 HSD11B2P80365 405 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 POU4F2Q12837 409 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 CLCA4Q14CN2 919 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 ELMOD2Q8IZ81 293 aa8.69□□□□□ -1.02
SYNE3-205ENST00000557275 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms