RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	WDR26	Q9H7D7	661 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	MCCC2	Q9HCC0	563 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	ANLN	Q9NQW6	1124 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	KCTD5	Q9NXV2	234 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	MOSPD1	Q9UJG1	213 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	CBLC	Q9ULV8	474 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	SUFU	Q9UMX1	484 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	SMC3	Q9UQE7	1217 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC17A4	Q9Y2C5	497 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	REXO2	Q9Y3B8	237 aa	Known RBP	4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	ACTL7A	Q9Y615	435 aa		4.64	□□□□□ -1.67
SCFD1-223	ENST00000557076	CROCC	Q5TZA2	2017 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	PCSK5	Q92824	1860 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TRBV23-1	A0A0A0MS06	115 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CCDC66	A2RUB6	948 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076		A6NL46	340 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076		E5RJQ4	531 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	PMM2	O15305	246 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	KCNN4	O15554	427 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	THAP12	O43422	761 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	KDELR3	O43731	214 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	IPO13	O94829	963 aa	Known RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMEM63A	O94886	807 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ALPP	P05187	535 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	RAB40AL	P0C0E4	278 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	AGA	P20933	346 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TEAD1	P28347	426 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	HNRNPH3	P31942	346 aa	Known RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	MMP12	P39900	470 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	GNPDA1	P46926	289 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SOX8	P57073	446 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	PDE1B	Q01064	536 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	IL10RA	Q13651	578 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CBWD6	Q4V339	395 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CBWD3	Q5JTY5	395 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CBWD5	Q5RIA9	395 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	FCRL6	Q6DN72	434 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	DENND1B	Q6P3S1	775 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	MTFR2	Q6P444	385 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC9B2	Q86UD5	537 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	FJX1	Q86VR8	437 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZADH2	Q8N4Q0	377 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	LINC00301	Q8NCQ3	95 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CALML6	Q8TD86	181 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC37A2	Q8TED4	501 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	COG1	Q8WTW3	980 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	FAR1	Q8WVX9	515 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TM9SF4	Q92544	642 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZG16B	Q96DA0	208 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMX3	Q96JJ7	454 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	OR6C1	Q96RD1	312 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SRPK1	Q96SB4	655 aa	Known RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	NPY6R	Q99463	290 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZYG11B	Q9C0D3	744 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	UCK1	Q9HA47	277 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	METTL14	Q9HCE5	456 aa	Known RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SMURF1	Q9HCE7	757 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	PIGV	Q9NUD9	493 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	EXOC1	Q9NV70	894 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	COX16	Q9P0S2	106 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	LNPEP	Q9UIQ6	1025 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	CNTN6	Q9UQ52	1028 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	NTNG1	Q9Y2I2	539 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ATP8A1	Q9Y2Q0	1164 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	VWA7	Q9Y334	891 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	SNX10	Q9Y5X0	201 aa		4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TNRC6A	Q8NDV7	1962 aa	Known RBP	4.63	□□□□□ -1.67
SCFD1-223	ENST00000557076	TLDC2	A0PJX2	215 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMEM200C	A6NKL6	621 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	E2F3	O00716	465 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	MED7	O43513	233 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	BUB1	O43683	1085 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	RAMP2	O60895	175 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMCC1	O94876	653 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	IGSF6	O95976	241 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	MYL1	P05976	194 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	GM2A	P17900	193 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	NELFE	P18615	380 aa	Known RBP	4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ACTR1B	P42025	376 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	PPM1F	P49593	454 aa	Predicted RBP	4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	VAV2	P52735	878 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ART1	P52961	327 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	SNX16	P57768	344 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ACTR1A	P61163	376 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	POLR2L	P62875	67 aa	Known RBP	4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	NFATC2	Q13469	925 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	MYBPC3	Q14896	1274 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ASIC2	Q16515	512 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ANO6	Q4KMQ2	910 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	PYCR3	Q53H96	274 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	PWWP2B	Q6NUJ5	590 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	FAM173B	Q6P4H8	233 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	SHC4	Q6S5L8	630 aa		4.62	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZNF662	Q6ZS27	426 aa		4.62	□□□□□ -1.67

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