RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 FAM83EQ2M2I3 478 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 GALNTL6Q49A17 601 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TMEM240Q5SV17 173 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 N4BP2L1Q5TBK1 243 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 FBXO42Q6P3S6 717 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CDHR3Q6ZTQ4 885 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 RAPH1Q70E73 1250 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 UBE2Q1Q7Z7E8 422 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 FAM217AQ8IXS0 508 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 PGBD5Q8N414 524 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MAB21L3Q8N8X9 362 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TDRD5Q8NAT2 981 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 OR7D4Q8NG98 312 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 OR52N2Q8NGI0 321 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 FIBINQ8TAL6 211 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 SPPL3Q8TCT6 385 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 PPP4R1Q8TF05 950 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 DDI1Q8WTU0 396 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 STYXQ8WUJ0 223 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 HDAC10Q969S8 669 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 RMDN1Q96DB5 314 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CCDC126Q96EE4 140 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MYEOVQ96EZ4 313 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZNF419Q96HQ0 510 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZNF778Q96MU6 729 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CLUHP3Q96NS8 147 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ELF4Q99607 663 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 GPR22Q99680 433 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 C19orf43Q9BQ61 176 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 LBHD1Q9BQE6 289 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 MGME1Q9BQP7 344 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 NDC1Q9BTX1 674 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 SLC46A2Q9BY10 475 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 PITHD1Q9GZP4 211 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 MFSD1Q9H3U5 465 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TASP1Q9H6P5 420 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 NMRAL1Q9HBL8 299 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZNF334Q9HCZ1 680 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 SLCO1B3Q9NPD5 702 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ACSS2Q9NR19 701 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 SAR1AQ9NR31 198 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 INTS7Q9NVH2 962 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 HACD3Q9P035 362 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CFAP97Q9P2B7 532 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TBC1D14Q9P2M4 693 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 VPS28Q9UK41 221 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CORO1CQ9ULV4 474 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 ARHGAP26Q9UNA1 814 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 RUVBL2Q9Y230 463 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 OR51B4Q9Y5P0 310 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 XIRP2A4UGR9 3374 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZSWIM8A7E2V4 1837 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 A0A0A6YYJ9 748 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 A0A0G2JND7 137 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CCDC189A1A4V9 331 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TMEM114B3SHH9 223 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ANKRD66B4E2M5 251 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 C5orf67F2Z3F1 127 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLCO1B7G3V0H7 640 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 GOLGA8TH3BQL2 631 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC9A3R1O14745 358 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 CD3EAPO15446 510 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 DNAJC6O75061 913 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SNNO75324 88 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 RPP40O75818 363 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 DNAJC8O75937 253 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 HAUS5O94927 633 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 KLHL2O95198 593 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 PCDH8O95206 1070 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 GSRP00390 522 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 POU2F2P09086 479 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 RBP1P09455 135 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 DLDP09622 509 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 LINC00271P0C7V0 271 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 MYL2P10916 166 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 TYRP1P17643 537 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SAT1P21673 171 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 LPOP22079 712 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 GABRB3P28472 473 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CTNNB1P35222 781 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SERPINB5P36952 375 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 PPARGP37231 505 aaPredicted RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 SKIV2L2P42285 1042 aaKnown RBP4.42□□□□□ -1.7
SRP54-212ENST00000556992 SLC1A6P48664 564 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CSRP3P50461 194 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CLCN4P51793 760 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 MNAT1P51948 309 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 RHOAP61586 193 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 OCRLQ01968 901 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 SULT2A1Q06520 285 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 CD69Q07108 199 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 BST1Q10588 318 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 DMC1Q14565 340 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 IHHQ14623 411 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 GRM3Q14832 879 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 ACAP2Q15057 778 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 FSCBQ5H9T9 825 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 GPR158Q5T848 1215 aa4.42□□□□□ -1.7
SRP54-212ENST00000556992 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms