RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ALOX12BO75342 701 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 TPH1P17752 444 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 CTNNA2P26232 953 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 MAGEA1P43355 309 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 EIF3EP60228 445 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 ANKRD20A2Q5SQ80 823 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 ANKRD20A1Q5TYW2 823 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 ANKRD20A3Q5VUR7 823 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 HOOK3Q86VS8 718 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 SERPINA9Q86WD7 417 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 AMIGO1Q86WK6 493 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 FAM20CQ8IXL6 584 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 CISD2Q8N5K1 135 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 OR5AR1Q8NGP9 310 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 ZFPM2Q8WW38 1151 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 ULK4Q96C45 1275 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 SGSM3Q96HU1 749 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 LINC00615Q96LM1 132 aaPredicted RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 LRFN5Q96NI6 719 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 CCM2Q9BSQ5 444 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 SPRTNQ9H040 489 aaPredicted RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 FAM60AQ9NP50 221 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 DHCR7Q9UBM7 475 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 SERTAD3Q9UJW9 196 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 ICKQ9UPZ9 632 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 CDYLQ9Y232 598 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 TDRKHQ9Y2W6 561 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 PTRH2Q9Y3E5 179 aaKnown RBP14.31□□□□□ -0.12
CHD8-211ENST00000556833 NUP210LQ5VU65 1888 aa14.31□□□□□ -0.12
CHD8-211ENST00000556833 CREBBPQ92793 2442 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 C2orf74A8MZ97 194 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 APOC4-APOC2K7ER74 178 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 MAP3K7O43318 606 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 CRTAMO95727 393 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 APOC2P02655 101 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 CSE1LP55060 971 aaKnown RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 PRPSAP1Q14558 356 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 ZIC1Q15915 447 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 PLEKHN1Q494U1 663 aaPredicted RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 RANBP10Q6VN20 620 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 MED25Q71SY5 747 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 SNX20Q7Z614 316 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 MRGPREQ86SM8 312 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 RAB43Q86YS6 212 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 CDKL3Q8IVW4 592 aaPredicted RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 GPR135Q8IZ08 494 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 ADGRF3Q8IZF5 1079 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 C19orf47Q8N9M1 422 aaKnown RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 TMEM102Q8N9M5 508 aaPredicted RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 LMNTD1Q8N9Z9 388 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 PNPLA2Q96AD5 504 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 SNRNP40Q96DI7 357 aaKnown RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 TCTN2Q96GX1 697 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 SLC29A3Q9BZD2 475 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 ASF1BQ9NVP2 202 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 SPHK1Q9NYA1 384 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 ZDHHC3Q9NYG2 299 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 CIDEBQ9UHD4 219 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 GPN3Q9UHW5 284 aaPredicted RBP14.3□□□□□ -0.12
CHD8-211ENST00000556833 INTUQ9ULD6 942 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 PRSS21Q9Y6M0 314 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 ANKRD12Q6UB98 2062 aa14.3□□□□□ -0.12
CHD8-211ENST00000556833 DOCK10Q96BY6 2186 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 DOPEY1Q5JWR5 2465 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 OR51F1A6NGY5 319 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 AKR1B15C9JRZ8 316 aaPredicted RBP14.29□□□□□ -0.12
CHD8-211ENST00000556833 MATN2O00339 956 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 OR2B3O76000 313 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 CLDN1O95832 211 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 RBP3P10745 1247 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 UGT2B7P16662 529 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 AGXTP21549 392 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 ACRV1P26436 265 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 RRADP55042 308 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 POU6F1Q14863 301 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 DENND5AQ6IQ26 1287 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 PIANPQ8IYJ0 282 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 CARFQ8N187 725 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 ZNF655Q8N720 491 aaPredicted RBP14.29□□□□□ -0.12
CHD8-211ENST00000556833 TFGQ92734 400 aaPredicted RBP14.29□□□□□ -0.12
CHD8-211ENST00000556833 PITPNM3Q9BZ71 974 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 ZBTB20Q9HC78 741 aaPredicted RBP14.29□□□□□ -0.12
CHD8-211ENST00000556833 SMARCAL1Q9NZC9 954 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 ERRFI1Q9UJM3 462 aaPredicted RBP14.29□□□□□ -0.12
CHD8-211ENST00000556833 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 KLHL20Q9Y2M5 609 aa14.29□□□□□ -0.12
CHD8-211ENST00000556833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD8-211ENST00000556833 CELSR2Q9HCU4 2923 aa14.28□□□□□ -0.12
CHD8-211ENST00000556833 PJA2O43164 708 aa14.28□□□□□ -0.12
CHD8-211ENST00000556833 CNOT3O75175 753 aaKnown RBP14.28□□□□□ -0.12
CHD8-211ENST00000556833 SVILO95425 2214 aa14.28□□□□□ -0.12
CHD8-211ENST00000556833 PYGMP11217 842 aa14.28□□□□□ -0.12
CHD8-211ENST00000556833 FOLR3P41439 243 aa14.28□□□□□ -0.12
CHD8-211ENST00000556833 MSLNQ13421 630 aaPredicted RBP14.28□□□□□ -0.12
CHD8-211ENST00000556833 BOP1Q14137 746 aaKnown RBP14.28□□□□□ -0.12
CHD8-211ENST00000556833 TCEAL1Q15170 157 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms