RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 BTN3A1O00481 513 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 SLC30A4O14863 429 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 TNFSF14O43557 240 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 TCEA3O75764 348 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 TSPAN12O95859 305 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 SYF2O95926 243 aaKnown RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 MT-ND3P03897 115 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 C2P06681 752 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 MAP4P27816 1152 aaKnown RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 NDUFS1P28331 727 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 IRF9Q00978 393 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 ZNF844Q08AG5 666 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 CASP8Q14790 479 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 CEP85LQ5SZL2 805 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 UNC5DQ6UXZ4 953 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 NEK10Q6ZWH5 1172 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 UBE2R2Q712K3 238 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 TDRPQ86YL5 185 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 CYP4X1Q8N118 509 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 OR5K2Q8NHB8 316 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 BAHD1Q8TBE0 780 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 SH3KBP1Q96B97 665 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 ROPN1BQ9BZX4 212 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 MVB12BQ9H7P6 319 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 ROPN1Q9HAT0 212 aaPredicted RBP13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 PCMTD2Q9NV79 361 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 LRP4O75096 1905 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 CACNA1EQ15878 2313 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 TMEM131Q92545 1883 aa13.68□□□□□ -0.22
VIPAS39-208ENST00000556412 A0A087X1B8 175 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 SPAARA0A1B0GVQ0 90 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 EME2A4GXA9 379 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 KRT87PA6NCN2 255 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 NPEPPSL1A6NEC2 478 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 GOLGA8RI6L899 631 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 MATN4O95460 622 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CATP04040 527 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 NOVA1P51513 510 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CYHR1Q6ZMK1 362 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 TMEM26Q6ZUK4 368 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 DCUN1D3Q8IWE4 304 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 TBC1D21Q8IYX1 336 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 OR6C4Q8NGE1 309 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 KCTD4Q8WVF5 259 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 XKR8Q9H6D3 395 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 KIR3DX1Q9H7L2 352 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 ADAMTS6Q9UKP5 1117 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 ARHGEF33A8MVX0 844 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CDC7O00311 574 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 ZBTB14O43829 449 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 C1orf105O95561 183 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 MPOP05164 745 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 OR1D5P58170 312 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 CCSMST1Q4G0I0 132 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 RBM12BQ8IXT5 1001 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 IQCKQ8N0W5 287 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 OR52E1Q8NGJ3 308 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 ASB11Q8WXH4 323 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 AHCYL2Q96HN2 611 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 NRTNQ99748 197 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 UTP6Q9NYH9 597 aaKnown RBP13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 IKZF3Q9UKT9 509 aa13.67□□□□□ -0.22
VIPAS39-208ENST00000556412 A0A1W2PPM1 405 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 GIPC1O14908 333 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 PSIP1O75475 530 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 RFPL1O75677 317 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 WISP3O95389 354 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 C8GP07360 202 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 LTA4HP09960 611 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 TYRP1P17643 537 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 CYP2A7P20853 494 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 ACP1P24666 158 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 CCNFP41002 786 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 GLRBP48167 497 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 ACADVLP49748 655 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 SIM1P81133 766 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 DNAH14Q0VDD8 3507 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 TSNQ15631 228 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 OR4E2Q8NGC2 313 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 OR10G6Q8NH81 332 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 MAGEC3Q8TD91 643 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 ISL2Q96A47 359 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 NXNL1Q96CM4 212 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 TSNARE1Q96NA8 513 aa13.66□□□□□ -0.22
VIPAS39-208ENST00000556412 DERL2Q9GZP9 239 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms