RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TRPM7Q96QT4 1865 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 A6NLC8 198 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 WISP2O76076 250 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 ICAM1P05362 532 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 SPARCP09486 303 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 GNAZP19086 355 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 TM4SF1P30408 202 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 CTSCP53634 463 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 ITGA9Q13797 1035 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 C1orf141Q5JVX7 400 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 ZNF790Q6PG37 636 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 FAM43BQ6ZT52 329 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-209ENST00000556353 SEPT14Q6ZU15 432 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 SLC38A9Q8NBW4 561 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 TMEM116Q8NCL8 245 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 IL17REQ8NFR9 667 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 ART5Q96L15 291 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 PRMT6Q96LA8 375 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-209ENST00000556353 PSD2Q9BQI7 771 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 PDCL3Q9H2J4 239 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 APOBEC3GQ9HC16 384 aaKnown RBP4.6□□□□□ -1.67
PRPF39-209ENST00000556353 C2orf42Q9NWW7 574 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 KNSTRNQ9Y448 316 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 COL2A1P02458 1487 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-209ENST00000556353 LRRC37AA6NMS7 1700 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 SPEF2Q9C093 1822 aa4.6□□□□□ -1.67
PRPF39-209ENST00000556353 TP53BP1Q12888 1972 aaPredicted RBP4.6□□□□□ -1.67
PRPF39-209ENST00000556353 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 TPD52L2O43399 206 aaKnown RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SYNCRIPO60506 623 aaKnown RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 DAB1O75553 588 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 LIPFP07098 398 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 IGHV4-38-2P0DP08 117 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 RFC4P35249 363 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 LUMP51884 338 aaPredicted RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 TAS2R40P59535 323 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 CEBPZQ03701 1054 aaKnown RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SPOCK1Q08629 439 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 GOLGA8DPQ0D2H9 430 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 PSME4Q14997 1843 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SCN9AQ15858 1988 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 RAB6CQ53S08 254 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 R3HCC1LQ7Z5L2 792 aaKnown RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 CCDC190Q86UF4 302 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 RASGEF1CQ8N431 466 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 GCSAMQ8N6F7 178 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 C1orf52Q8N6N3 182 aaKnown RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 MAPK1IP1LQ8NDC0 245 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SGCDQ92629 289 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 ANKRD9Q96BM1 317 aaPredicted RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SENP5Q96HI0 755 aaPredicted RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 SEPT5Q99719 369 aaPredicted RBP4.59□□□□□ -1.67
PRPF39-209ENST00000556353 RAB6CQ9H0N0 254 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 PREBQ9HCU5 417 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 HEG1Q9ULI3 1381 aa4.59□□□□□ -1.67
PRPF39-209ENST00000556353 CEP290O15078 2479 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 MYH3P11055 1940 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 THSD7BQ9C0I4 1608 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 A0A1W2PPH5 198 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 A0A1W2PQF6 199 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 A6NL46 340 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 MAP2K7O14733 419 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 NDUFS3O75489 264 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 BMP10O95393 424 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 DEKP35659 375 aaKnown RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 MAP2K2P36507 400 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 PBX3P40426 434 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 EIF5P55010 431 aaKnown RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 IRX1P78414 480 aaPredicted RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 TFAP4Q01664 338 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 NAB2Q15742 525 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 SLC1A5Q15758 541 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 KIAA1644Q3SXP7 199 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 ZFP69Q49AA0 526 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 NDUFAF5Q5TEU4 345 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 RNF168Q8IYW5 571 aaPredicted RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 EGLN2Q96KS0 407 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 SLX1AQ9BQ83 275 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 EPB41L5Q9HCM4 733 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 NARFQ9UHQ1 456 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 R3HDM2Q9Y2K5 976 aaKnown RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 YIPF1Q9Y548 306 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 PRSS21Q9Y6M0 314 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 RANBP2P49792 3224 aaKnown RBP4.58□□□□□ -1.68
PRPF39-209ENST00000556353 A0A1B0GUL6 1792 aa4.58□□□□□ -1.68
PRPF39-209ENST00000556353 DUOX1Q9NRD9 1551 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 ABCC12Q96J65 1359 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 H3BQ06 376 aaPredicted RBP4.57□□□□□ -1.68
PRPF39-209ENST00000556353 PLA2G4BP0C869 781 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 ZNF26P17031 533 aaPredicted RBP4.57□□□□□ -1.68
PRPF39-209ENST00000556353 PRKAR2BP31323 418 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 CD81P60033 236 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 LRMPQ12912 555 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 SOWAHCQ53LP3 525 aaPredicted RBP4.57□□□□□ -1.68
PRPF39-209ENST00000556353 LRIF1Q5T3J3 769 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 PRR5LQ6MZQ0 368 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 STXBP4Q6ZWJ1 553 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 SPEM1Q8N4L4 309 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 DDHD1Q8NEL9 900 aa4.57□□□□□ -1.68
PRPF39-209ENST00000556353 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms