RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ASPHQ12797 758 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 KRT33BQ14525 404 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 LPAL2Q16609 132 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 KIF19Q2TAC6 998 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 UAP1L1Q3KQV9 507 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 CAPRIN2Q6IMN6 1127 aaKnown RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TTC23LQ6PF05 361 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 IL27RAQ6UWB1 636 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SBSNQ6UWP8 590 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 GKN2Q86XP6 184 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 NRROSQ86YC3 692 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SLC22A9Q8IVM8 553 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SDR16C5Q8N3Y7 309 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TMEM151AQ8N4L1 468 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 CCL4L1Q8NHW4 92 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 LMX1AQ8TE12 382 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TFGQ92734 400 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 RMDN2Q96LZ7 410 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 C12orf66Q96MD2 445 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 LRFN3Q9BTN0 628 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 LRRC61Q9BV99 259 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TRIT1Q9H3H1 467 aaKnown RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 RDH14Q9HBH5 336 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 PRDM8Q9NQV8 689 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ARL15Q9NXU5 204 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 NUDT4Q9NZJ9 180 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TAAR2Q9P1P5 351 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 COPG2Q9UBF2 871 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 IKZF3Q9UKT9 509 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 PCOLCE2Q9UKZ9 415 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 DOLKQ9UPQ8 538 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ASF1AQ9Y294 204 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SNX11Q9Y5W9 270 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ST14Q9Y5Y6 855 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 HEBP2Q9Y5Z4 205 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SDK1Q7Z5N4 2213 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 TARM1B6A8C7 271 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 G3V2L1 256 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 UBXN8O00124 270 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 FFAR2O15552 330 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 DFNA5O60443 496 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 EPN2O95208 641 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 C1orf105O95561 183 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 BPGMP07738 259 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 SYPP08247 313 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 SBK3P0C264 359 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 F3P13726 295 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ATP5F1P24539 256 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ALDH3A1P30838 453 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 KCNC1P48547 511 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 RPIAP49247 311 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 AP1S2P56377 157 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 C1orf61Q13536 156 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PCLAFQ15004 111 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 TGFBIQ15582 683 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 RPE65Q16518 533 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PHKG1Q16816 387 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PPP1R3AQ16821 1122 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 CDKL4Q5MAI5 379 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ABRAXAS1Q6UWZ7 409 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 NUDCD3Q8IVD9 361 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 C10orf107Q8IVU9 208 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 DCUN1D3Q8IWE4 304 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 TRIM42Q8IWZ5 723 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 FBXO15Q8NCQ5 510 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PPP1R14CQ8TAE6 165 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 INSM2Q96T92 566 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-208ENST00000555905 EGFL8Q99944 293 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ZDHHC5Q9C0B5 715 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 MVB12BQ9H7P6 319 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 IMP3Q9NV31 184 aaKnown RBP10.76□□□□□ -0.69
TMEM260-208ENST00000555905 SLC6A14Q9UN76 642 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PDE10AQ9Y233 779 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 WDR37Q9Y2I8 494 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PCDHGA5Q9Y5G8 931 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 COLEC10Q9Y6Z7 277 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 ANKRD12Q6UB98 2062 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 PI4KAP42356 2102 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 TMEM131Q92545 1883 aa10.76□□□□□ -0.69
TMEM260-208ENST00000555905 NCF1BA6NI72 391 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 OR5K4A6NMS3 321 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 NCF1CA8MVU1 366 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 ARHGEF33A8MVX0 844 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 YKT6O15498 198 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 AQP9O43315 295 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 KDM1AO60341 852 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 DLX3O60479 287 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 TRIM13O60858 407 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 H2AFYO75367 372 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 PIAS2O75928 621 aa10.75□□□□□ -0.69
TMEM260-208ENST00000555905 IPO13O94829 963 aaKnown RBP10.75□□□□□ -0.69
TMEM260-208ENST00000555905 GUCA1CO95843 209 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms