RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ULK1O75385 1050 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 CISD3P0C7P0 127 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 CYP2A6P11509 494 aaPredicted RBP23.75■■□□□ 1.39
TMEM260-207ENST00000555497 MYOGP15173 224 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 NCK1P16333 377 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 OXTRP30559 389 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 GGT5P36269 586 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 TRIM46Q7Z4K8 759 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 C12orf40Q86WS4 652 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 RSPRY1Q96DX4 576 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 SLC32A1Q9H598 525 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 SMOXQ9NWM0 555 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 FBXO10Q9UK96 956 aa23.75■■□□□ 1.39
TMEM260-207ENST00000555497 CNOT11Q9UKZ1 510 aaKnown RBP23.75■■□□□ 1.39
TMEM260-207ENST00000555497 TSPAN11A1L157 253 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 RGS14O43566 566 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 HNRNPA1P09651 372 aaKnown RBP eCLIP23.74■■□□□ 1.39
TMEM260-207ENST00000555497 CHN2P52757 468 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 MESP2Q0VG99 397 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 IRAK1BP1Q5VVH5 260 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 ISLR2Q6UXK2 745 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 OTUB2Q96DC9 234 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 RIOK2Q9BVS4 552 aaKnown RBP23.74■■□□□ 1.39
TMEM260-207ENST00000555497 SLC2A11Q9BYW1 496 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 PIF1Q9H611 641 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 C15orf38-AP3S2A0A0A6YYH1 394 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 DHRS12A0PJE2 317 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 SOBPA7XYQ1 873 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 EIF3FO00303 357 aaPredicted RBP23.74■■□□□ 1.39
TMEM260-207ENST00000555497 SLC28A1O00337 649 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 WDR47O94967 919 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 CYP17A1P05093 508 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 JAK1P23458 1154 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 SPATS1Q496A3 300 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 RNF165Q6ZSG1 346 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 ARPINQ7Z6K5 226 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 LEMD2Q8NC56 503 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 USP7Q93009 1102 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 CIB1Q99828 191 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 P2RY13Q9BPV8 354 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 KCTD14Q9BQ13 255 aaPredicted RBP23.74■■□□□ 1.39
TMEM260-207ENST00000555497 EFHD1Q9BUP0 239 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 ZFP14Q9HCL3 533 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 IL36AQ9UHA7 158 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 AURKCQ9UQB9 309 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 NEUROG3Q9Y4Z2 214 aa23.74■■□□□ 1.39
TMEM260-207ENST00000555497 ALPK3Q96L96 1907 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 ARNTLO00327 626 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 TCF3P15923 654 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 VARSP26640 1264 aaKnown RBP23.73■■□□□ 1.39
TMEM260-207ENST00000555497 PLIN5Q00G26 463 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 SELPLGQ14242 412 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 CPSF6Q16630 551 aaKnown RBP eCLIP23.73■■□□□ 1.39
TMEM260-207ENST00000555497 CDKL4Q5MAI5 379 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 HENMT1Q5T8I9 393 aaKnown RBP23.73■■□□□ 1.39
TMEM260-207ENST00000555497 ERMP1Q7Z2K6 904 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 PTRH1Q86Y79 214 aaKnown RBP23.73■■□□□ 1.39
TMEM260-207ENST00000555497 HID1Q8IV36 788 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 ADGRG5Q8IZF4 528 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 PPWD1Q96BP3 646 aaKnown RBP23.73■■□□□ 1.39
TMEM260-207ENST00000555497 PYCR2Q96C36 320 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 PPM1MQ96MI6 270 aa23.73■■□□□ 1.39
TMEM260-207ENST00000555497 CLDN9O95484 217 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 C8GP07360 202 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 GRIA2P42262 883 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 EEFSECP57772 596 aaKnown RBP23.72■■□□□ 1.39
TMEM260-207ENST00000555497 DCDC1P59894 354 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 CNBD2Q96M20 576 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 TRIM15Q9C019 465 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 ACTR8Q9H981 624 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 TCRBV5S2A0A599 114 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 TMEM202A6NGA9 273 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 GFYI3L273 518 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 AKAP10O43572 662 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 PRAMEF4O60810 478 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 MPC1LP0DKB6 136 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 CKMT2P17540 419 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 NNMTP40261 264 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF805Q5CZA5 627 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 TBCELQ5QJ74 424 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 PLEKHS1Q5SXH7 462 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 PRAMEF9Q5VWM5 478 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 NEK5Q6P3R8 708 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 SUSD1Q6UWL2 747 aa23.72■■□□□ 1.39
TMEM260-207ENST00000555497 RBM23Q86U06 439 aaKnown RBP23.72■■□□□ 1.39
TMEM260-207ENST00000555497 RALGPS2Q86X27 583 aaPredicted RBP23.72■■□□□ 1.39
TMEM260-207ENST00000555497 MRPS23Q9Y3D9 190 aaKnown RBP23.72■■□□□ 1.39
TMEM260-207ENST00000555497 OR2AG2A6NM03 316 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 SEC22BO75396 215 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 NPPAP01160 153 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 ENO2P09104 434 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-207ENST00000555497 PSMC3P17980 439 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 GNPDA1P46926 289 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 SLC6A12P48065 614 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 OR4D2P58180 307 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 PTCHD3Q3KNS1 767 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 APLFQ8IW19 511 aaPredicted RBP23.71■■□□□ 1.39
TMEM260-207ENST00000555497 LIX1Q8N485 282 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 HERVK_113Q902F9 699 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 ELMO1Q92556 727 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms