RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 FOPNLQ96NB1 174 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 FERD3LQ96RJ6 166 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 RTKNQ9BST9 563 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 TFB2MQ9H5Q4 396 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 STN1Q9H668 368 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 KIR3DX1Q9H7L2 352 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 IMP3Q9NV31 184 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 DLL3Q9NYJ7 618 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 CDV3Q9UKY7 258 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 PLAAQ9Y263 795 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 ASF1AQ9Y294 204 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 PCDHGA1Q9Y5H4 931 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 CFAP20Q9Y6A4 193 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 RNF215Q9Y6U7 377 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 A0A087X1B8 175 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 PRAMEF33A0A0G2JMD5 474 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 TRIM49D1C9J1S8 452 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 SLC16A5O15375 505 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 PHGDHO43175 533 aaKnown RBP12.35□□□□□ -0.43
SYNE2-219ENST00000555323 B4GAT1O43505 415 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 RFPL1O75677 317 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 RPN2P04844 631 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 MPOP05164 745 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 CCNFP41002 786 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ACADVLP49748 655 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 SERPINB8P50452 374 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 EPHA4P54764 986 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 DAB2P98082 770 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ZNF460Q14592 562 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-219ENST00000555323 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 CMC1Q7Z7K0 106 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 TRIM48Q8IWZ4 208 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 DEFB124Q8NES8 71 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 MAGEC3Q8TD91 643 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 RAD51AP1Q96B01 352 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 SLC12A9Q9BXP2 914 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 DERL2Q9GZP9 239 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 TWSG1Q9GZX9 223 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 TRIT1Q9H3H1 467 aaKnown RBP12.35□□□□□ -0.43
SYNE2-219ENST00000555323 SNX15Q9NRS6 342 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ARGLU1Q9NWB6 273 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-219ENST00000555323 TOR4AQ9NXH8 423 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ACOT9Q9Y305 439 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 ZNF292O60281 2723 aa12.35□□□□□ -0.43
SYNE2-219ENST00000555323 A0A096LPK6 155 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CCDC189A1A4V9 331 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 RHPN2P1A8MT19 583 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 ZW10O43264 779 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 ZBTB14O43829 449 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 C8GP07360 202 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CCDC166P0CW27 439 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 TPBGLP0DKB5 382 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CDK4P11802 303 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 COL6A2P12110 1019 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 ATP6V0D1P61421 351 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 E2F1Q01094 437 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 SP140Q13342 867 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 GPR18Q14330 331 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 GRB7Q14451 532 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 PPM1JQ5JR12 505 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 LRIG3Q6UXM1 1119 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 RAPH1Q70E73 1250 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 PIWIL4Q7Z3Z4 852 aaKnown RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CROCCP2Q86T23 111 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 DCUN1D3Q8IWE4 304 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 OR5AR1Q8NGP9 310 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 EPS8L3Q8TE67 593 aaKnown RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 SKA2Q8WVK7 121 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 DLG3Q92796 817 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 ZIM3Q96PE6 472 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 SLC38A3Q99624 504 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 MENTQ9BUN1 341 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 EPB41L1Q9H4G0 881 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 LGALS13Q9UHV8 139 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
SYNE2-219ENST00000555323 NOVA2Q9UNW9 492 aaKnown RBP12.34□□□□□ -0.43
SYNE2-219ENST00000555323 FAM221BA6H8Z2 402 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 ARHGEF33A8MVX0 844 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CD1DP15813 335 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 SLCO1A2P46721 670 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 GPLD1P80108 840 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF844Q08AG5 666 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 DLG1Q12959 904 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 PRKG2Q13237 762 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms