RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CLCN7P51798 805 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 MAPK10P53779 464 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 ADARP55265 1226 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 CBLBQ13191 982 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 CUL1Q13616 776 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 GRB7Q14451 532 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 KRT33BQ14525 404 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 GBX1Q14549 363 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 TBC1D25Q3MII6 688 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 RNF187Q5TA31 235 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 C8orf74Q6P047 294 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 CNTN4Q8IWV2 1026 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 MMGT1Q8N4V1 131 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 BMPERQ8N8U9 685 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 ACVR1CQ8NER5 493 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 KIF18AQ8NI77 898 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 USP7Q93009 1102 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 GRAMD1AQ96CP6 724 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 NAF1Q96HR8 494 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 IL17FQ96PD4 163 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 FAM167BQ9BTA0 163 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 ZDHHC18Q9NUE0 388 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 INTS10Q9NVR2 710 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 HRASLS2Q9NWW9 162 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
SYNE2-214ENST00000554928 PCDHGA8Q9Y5G5 932 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 ZZEF1O43149 2961 aa12.01□□□□□ -0.49
SYNE2-214ENST00000554928 IGHV5-51A0A0C4DH38 117 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 EFCAB7A8K855 629 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 KIF2AO00139 706 aaPredicted RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 ZW10O43264 779 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 PRAMEF10O60809 474 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 C1QAP02745 245 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 AHSGP02765 367 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 APOA4P06727 396 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 JMJD7P0C870 316 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 CHRM3P20309 590 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 NDUFS1P28331 727 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 SSTR1P30872 391 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 KPNA2P52292 529 aaKnown RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 CDKN2DP55273 166 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 GPX6P59796 221 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 SH3BP2P78314 561 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 GUCY2DQ02846 1103 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 CALCOCO2Q13137 446 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 TRA2AQ13595 282 aaKnown RBP eCLIP12□□□□□ -0.49
SYNE2-214ENST00000554928 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 PLXDC1Q8IUK5 500 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 ADGRF3Q8IZF5 1079 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 ZBTB2Q8N680 514 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 BBOF1Q8ND07 529 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 ASZ1Q8WWH4 475 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 LCN9Q8WX39 176 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 SEC14L1Q92503 715 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 LRRC39Q96DD0 335 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 PANX3Q96QZ0 392 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 GPR21Q99679 349 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 MAP3K3Q99759 626 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 CTRCQ99895 268 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 NAT9Q9BTE0 207 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 AARSD1Q9BTE6 412 aaKnown RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 MENTQ9BUN1 341 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 RAB17Q9H0T7 212 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 EPB41L1Q9H4G0 881 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 MVB12BQ9H7P6 319 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 APMAPQ9HDC9 416 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 PPANQ9NQ55 473 aaKnown RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 SIDT1Q9NXL6 827 aaKnown RBP12□□□□□ -0.49
SYNE2-214ENST00000554928 SPHK1Q9NYA1 384 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 MOCS1Q9NZB8 636 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 EPHA6Q9UF33 1036 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 HEBP2Q9Y5Z4 205 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 COLEC10Q9Y6Z7 277 aa12□□□□□ -0.49
SYNE2-214ENST00000554928 CTAGE15A4D2H0 777 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TMEM8BA6NDV4 472 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CXorf49A8MYA2 514 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TMX2-CTNND1H3BSU7 103 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 HGSO14964 777 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TUBB4AP04350 444 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ITGA2BP08514 1039 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CTAGE8P0CG41 777 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ITPKBP27987 946 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 RBMS1P29558 406 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ECHS1P30084 290 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 SLC5A2P31639 672 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 SRSF6Q13247 344 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
SYNE2-214ENST00000554928 KCNAB1Q14722 419 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 TMED2Q15363 201 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CACHD1Q5VU97 1274 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 ZNF449Q6P9G9 518 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 IGF2-ASQ6U949 168 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 PRSS42Q7Z5A4 293 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CLEC14AQ86T13 490 aa11.99□□□□□ -0.49
SYNE2-214ENST00000554928 CTAGE6Q86UF2 777 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms