RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 PRKAA1Q13131 559 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 PRKG2Q13237 762 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 KRT33BQ14525 404 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 PRPSAP1Q14558 356 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 ZIC1Q15915 447 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 PTCHD3Q3KNS1 767 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 CCDC181Q5TID7 509 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 CDHR3Q6ZTQ4 885 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 ATCAYQ86WG3 371 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 SYTL1Q8IYJ3 562 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 CLDN19Q8N6F1 224 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 LRRC57Q8N9N7 239 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 Q8NA96 180 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 GALNT11Q8NCW6 608 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 FLVCR1-AS1Q8TAF5 88 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 CPT1CQ8TCG5 803 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 TFGQ92734 400 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 CDKN2AIPNLQ96HQ2 116 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 NUDT9Q9BW91 350 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 LACRTQ9GZZ8 138 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 KLHL25Q9H0H3 589 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 MVB12BQ9H7P6 319 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 ACTR5Q9H9F9 607 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 SYTL2Q9HCH5 934 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 FAM60AQ9NP50 221 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 SNX7Q9UNH6 387 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 PRSS21Q9Y6M0 314 aa11.84□□□□□ -0.51
MTHFD1-207ENST00000554677 UNC79Q9P2D8 2635 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 SOWAHDA6NJG2 315 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 BTNL10A8MVZ5 291 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 CFAP99D6REC4 459 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ZNF749O43361 778 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 KLF7O75840 302 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 TMEM63AO94886 807 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 CTSBP07858 339 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ACADLP28330 430 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 RWDD2BP57060 319 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 RPA4Q13156 261 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 SPA17Q15506 151 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 DBN1Q16643 649 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 PARP6Q2NL67 630 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ZRANB3Q5FWF4 1079 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 HIST2H2BCQ6DN03 193 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 AMIGO1Q86WK6 493 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 RBMXL3Q8N7X1 1067 aaKnown RBP11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 GLIS1Q8NBF1 620 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 CLIP3Q96DZ5 547 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 OR2A14Q96R47 310 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ACTR10Q9NZ32 417 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 SERTAD3Q9UJW9 196 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ICKQ9UPZ9 632 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 ZNF451Q9Y4E5 1061 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 NUP210LQ5VU65 1888 aa11.83□□□□□ -0.52
MTHFD1-207ENST00000554677 HEATR5BQ9P2D3 2071 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 MACROD2A1Z1Q3 448 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 GRID2IPA4D2P6 1211 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 MROH6A6NGR9 719 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 IFRD1O00458 451 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 ZNF185O15231 689 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 STK10O94804 968 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 TJP3O95049 919 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 RNF224P0DH78 156 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 CBSLP0DN79 551 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 CYP2A7P20853 494 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 CBSP35520 551 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 CYLC1P35663 651 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 VAV2P52735 878 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 NCF4Q15080 339 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 INPP5JQ15735 1006 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 PRR30Q53SZ7 412 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 JMJD6Q6NYC1 403 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 SPESP1Q6UW49 350 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 RAD9BQ6WBX8 426 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 UNC5AQ6ZN44 842 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 TAS2R42Q7RTR8 314 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 TRIM73Q86UV7 250 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 TMEM151BQ8IW70 566 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 FAM71DQ8N9W8 422 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 OR5AR1Q8NGP9 310 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 STYXQ8WUJ0 223 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 SMAD5Q99717 465 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 FERMT1Q9BQL6 677 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 HGH1Q9BTY7 390 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 TRIM5Q9C035 493 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 SPRTNQ9H040 489 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 FANCEQ9HB96 536 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 PIH1D1Q9NWS0 290 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 SPHK1Q9NYA1 384 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 R3HDM2Q9Y2K5 976 aaKnown RBP11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 CELSR2Q9HCU4 2923 aa11.82□□□□□ -0.52
MTHFD1-207ENST00000554677 SLC5A10A0PJK1 596 aa11.81□□□□□ -0.52
MTHFD1-207ENST00000554677 OR51F1A6NGY5 319 aa11.81□□□□□ -0.52
MTHFD1-207ENST00000554677 A6NL46 340 aa11.81□□□□□ -0.52
MTHFD1-207ENST00000554677 C2orf74A8MZ97 194 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms