RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NATD1Q8N6N6 113 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TSPAN14Q8NG11 270 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GABPB2Q8TAK5 448 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FIBINQ8TAL6 211 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 IPCEF1Q8WWN9 437 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ASB12Q8WXK4 309 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SNX19Q92543 992 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PBXIP1Q96AQ6 731 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MSLNLQ96KJ4 702 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ALPK1Q96QP1 1244 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 UTP23Q9BRU9 249 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 POLR1EQ9GZS1 481 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 WDR55Q9H6Y2 383 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 WASH6PQ9NQA3 447 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 INIPQ9NRY2 104 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CATSPERZQ9NTU4 200 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ABCB8Q9NUT2 735 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GPATCH2Q9NW75 528 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 LMCD1Q9NZU5 365 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SH3BP4Q9P0V3 963 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 IFT80Q9P2H3 777 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 REV1Q9UBZ9 1251 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TESQ9UGI8 421 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ZMYM5Q9UJ78 669 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ENTPD4Q9Y227 616 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PCSK5Q92824 1860 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GIPC1O14908 333 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PIP5K1BO14986 540 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FOXS1O43638 330 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 STC2O76061 302 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SRP72O76094 671 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DDNO94850 711 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 OR6B1O95007 311 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 KLKB1P03952 638 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SERPINF2P08697 491 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 AMD1P17707 334 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MATN1P21941 496 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CBLP22681 906 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ETFBP38117 255 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 RGRP47804 291 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GCGRP47871 477 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 RXRGP48443 463 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PIK3CGP48736 1102 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ABHD18Q0P651 414 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SIM2Q14190 667 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FLOT2Q14254 428 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 HENMT1Q5T8I9 393 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 KLHL35Q6PF15 583 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 NPAS4Q8IUM7 802 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TNS4Q8IZW8 715 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 C10orf111Q8N326 155 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ATPAF2Q8N5M1 289 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CLDN22Q8N7P3 220 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PLA2G15Q8NCC3 412 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 OR6Q1Q8NGQ2 317 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SPATA22Q8NHS9 363 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PPP1R14CQ8TAE6 165 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GIPC2Q8TF65 315 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 BORCS5Q969J3 196 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 NCLNQ969V3 563 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ULK4Q96C45 1275 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 COQ10AQ96MF6 247 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PRPF18Q99633 342 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SYT17Q9BSW7 474 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GOLGA2P5Q9HBQ8 144 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 POLMQ9NP87 494 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FAM49BQ9NUQ9 324 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 VNN3Q9NY84 501 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GULP1Q9UBP9 304 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ADAM29Q9UKF5 820 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PADI3Q9ULW8 664 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SF3B6Q9Y3B4 125 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHGA4Q9Y5G9 962 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHGA10Q9Y5H3 936 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 C17orf113A0A1B0GUU1 675 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DHRS12A0PJE2 317 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM233B4DJY2 109 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 H0Y626 953 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 M0R082 166 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 STK25O00506 426 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MRASO14807 208 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CLOCKO15516 846 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SC5DO75845 299 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PRKD3O94806 890 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 KCNK5O95279 499 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 NFATC1O95644 943 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MT-CYBP00156 380 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ADRA2AP08913 450 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CISD3P0C7P0 127 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CTPS1P17812 591 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CSRP1P21291 193 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SOX18P35713 384 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MNDAP41218 407 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 MASP1P48740 699 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 POLR2JP52435 117 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PCBP4P57723 403 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PFN3P60673 137 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 TRA2BP62995 288 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 IFITM3Q01628 133 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CREMQ03060 361 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms