RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 KPNA2P52292 529 aaKnown RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 RHDQ02161 417 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 ABRQ12979 859 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 DHX34Q14147 1143 aaKnown RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 TMTC4Q5T4D3 741 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 KIAA0930Q6ICG6 404 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 CYB5D1Q6P9G0 228 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 INO80CQ6PI98 192 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 AMIGO1Q86WK6 493 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 NLGN4XQ8N0W4 816 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 MCUQ8NE86 351 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 NLGN4YQ8NFZ3 816 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 LKAAEAR1Q8TD35 194 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 KLHL6Q8WZ60 621 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 KIAA1143Q96AT1 154 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 FAM136AQ96C01 138 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 PPM1MQ96MI6 270 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 SERPINB12Q96P63 405 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 PANX3Q96QZ0 392 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 NRTNQ99748 197 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 TRIM56Q9BRZ2 755 aaKnown RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 GPN2Q9H9Y4 310 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-213ENST00000554600 IL1RAPL1Q9NZN1 696 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 RARRES3Q9UL19 164 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 PLAGL1Q9UM63 463 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 NAV2Q8IVL1 2488 aa10.36□□□□□ -0.75
SHMT2-213ENST00000554600 FAM237BA0A1B0GVD1 139 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 MAGEB16A2A368 324 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SLC9B1P1A6NJY1 282 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 C2orf74A8MZ97 194 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 BHMG1C9JSJ3 638 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 BTN3A3O00478 584 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 BTN3A1O00481 513 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ZBTB11O95625 1053 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 RPN2P04844 631 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 LIFP15018 202 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 FOLR1P15328 257 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ARNTP27540 789 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 MAP4P27816 1152 aaKnown RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ACADLP28330 430 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 CCR7P32248 378 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SHMT2P34897 504 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 HSD11B2P80365 405 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ACY1Q03154 408 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 IL11RAQ14626 422 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 GPR19Q15760 415 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ANKRD20A4Q4UJ75 823 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SOWAHCQ53LP3 525 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 RNF187Q5TA31 235 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 IZUMO3Q5VZ72 239 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 PAPD7Q5XG87 772 aaKnown RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 NEPROQ6NW34 567 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 OTOAQ7RTW8 1153 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 LRRC6Q86X45 466 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 KMT5CQ86Y97 462 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 VRK3Q8IV63 474 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 TBC1D21Q8IYX1 336 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SLC22A15Q8IZD6 547 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 UNC5BQ8IZJ1 945 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ESX1Q8N693 406 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 GALNT6Q8NCL4 622 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 STAMBPL1Q96FJ0 436 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SLC41A2Q96JW4 573 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 BBC3Q96PG8 261 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 KLHL25Q9H0H3 589 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 TFB2MQ9H5Q4 396 aaKnown RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 FANCEQ9HB96 536 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 FGF21Q9NSA1 209 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 CIDEBQ9UHD4 219 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 POLG2Q9UHN1 485 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 PILRAQ9UKJ1 303 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 POMT2Q9UKY4 750 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 ICKQ9UPZ9 632 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 CRYL1Q9Y2S2 319 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 NEU2Q9Y3R4 380 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 PCDHGA4Q9Y5G9 962 aa10.35□□□□□ -0.75
SHMT2-213ENST00000554600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.35□□□□□ -0.755e-7■■□□□ 13.5
SHMT2-213ENST00000554600 TLN1Q9Y490 2541 aaKnown RBP10.35□□□□□ -0.75
SHMT2-213ENST00000554600 MED13Q9UHV7 2174 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PIPSLA2A3N6 862 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 E5RI56 91 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 DNALI1O14645 258 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 KPNA5O15131 536 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 NIPSNAP2O75323 286 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 SPAG6O75602 509 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 FGF5P12034 268 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PVRP15151 417 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 ZNF28P17035 718 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 CHRM3P20309 590 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 OGNP20774 298 aaKnown RBP10.34□□□□□ -0.75
SHMT2-213ENST00000554600 RPS3P23396 243 aaKnown RBP eCLIP10.34□□□□□ -0.756e-7■■■□□ 16.5
SHMT2-213ENST00000554600 AOAHP28039 575 aa10.34□□□□□ -0.75
SHMT2-213ENST00000554600 PRDX3P30048 256 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms