RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 GPR34Q9UPC5 381 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TBC1D30Q9Y2I9 924 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 CREBBPQ92793 2442 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 COL12A1Q99715 3063 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM131Q92545 1883 aa4.88□□□□□ -1.63
ATXN3-228ENST00000554592 UBR5O95071 2799 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MYLKQ15746 1914 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MYO9AB2RTY4 2548 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CCDC78A2IDD5 438 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 K7ERQ8 282 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 M0QYG6 137 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 RNF103O00237 685 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 IFRD1O00458 451 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 NKX2-8O15522 239 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ZW10O43264 779 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SMAD6O43541 496 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 KLRC4O43908 158 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 KRT38O76015 456 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 DDAH2O95865 285 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 IGLV3-25P01717 112 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 GRPP07492 148 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 PIM1P11309 404 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SYT1P21579 422 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 FDXRP22570 491 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 TBXAS1P24557 533 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ELAVL4P26378 380 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 APOBEC3AP31941 199 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CCR1P32246 355 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ACADSBP45954 432 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 RPL34P49207 117 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MXI1P50539 228 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 PEX5P50542 639 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CDH4P55283 916 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 UCP3P55916 312 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 YWHAZP63104 245 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 EIF4EBP2Q13542 120 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ARHGEF7Q14155 803 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CLPPQ16740 277 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 C5orf22Q49AR2 442 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 LACTB2Q53H82 288 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CARD16Q5EG05 197 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 AGAP9Q5VTM2 703 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 IZUMO3Q5VZ72 239 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 RETSATQ6NUM9 610 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SHC4Q6S5L8 630 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MACC1Q6ZN28 852 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 DPY19L3Q6ZPD9 716 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 PPP1R32Q7Z5V6 425 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 TAC4Q86UU9 113 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CEP57L1Q8IYX8 460 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SLC15A4Q8N697 577 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 TEX19Q8NA77 164 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 OR52K2Q8NGK3 314 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CLEC4CQ8WTT0 213 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SSC4DQ8WTU2 575 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SLC25A43Q8WUT9 341 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 APOBEC4Q8WW27 367 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 NEU4Q8WWR8 484 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 TFAP2BQ92481 460 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 FAM149B1Q96BN6 582 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ARHGEF26Q96DR7 871 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 PAGE5Q96GU1 130 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SLC45A3Q96JT2 553 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 MED15Q96RN5 788 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 HAPLN3Q96S86 360 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 HEPHQ9BQS7 1158 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
ATXN3-228ENST00000554592 POPDC2Q9HBU9 364 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 COQ4Q9Y3A0 265 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 CHST2Q9Y4C5 530 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 PLEKHM1Q9Y4G2 1056 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 HS3ST4Q9Y661 456 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 RNF215Q9Y6U7 377 aa4.87□□□□□ -1.63
ATXN3-228ENST00000554592 SPTAN1Q13813 2472 aaKnown RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TEX15Q9BXT5 2789 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 A0A087WWL8 130 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 C16orf96A6NNT2 1141 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 M0QYV0 167 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 B4GAT1O43505 415 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 SNAP91O60641 907 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 ZNF821O75541 412 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TM7SF2O76062 418 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CNTN5O94779 1100 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CPNE6O95741 557 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CHEK2O96017 543 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 TNFP01375 233 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 RHOCP08134 193 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 KRT7P08729 469 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 FGF3P11487 239 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-228ENST00000554592 CCL4P13236 92 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 LIFP15018 202 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 RRM1P23921 792 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 UGT1A3P35503 534 aa4.86□□□□□ -1.63
ATXN3-228ENST00000554592 DNA2P51530 1060 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms