RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 GLYATL1P3A0A0U1RQE8 302 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 MGAT4DA6NG13 374 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 AGAP14A8MT82 685 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 MIF4GDA9UHW6 222 aaKnown RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 BTN3A3O00478 584 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 KCNN4O15554 427 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 EPOP01588 193 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 MSL3P1P0C860 447 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 POU3F2P20265 443 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 XIAPP98170 497 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 MPP3Q13368 585 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 GTF2H3Q13889 308 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 SLC1A5Q15758 541 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 LDLRAP1Q5SW96 308 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 C1QL3Q5VWW1 255 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 DET1Q7L5Y6 550 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 OOSP2Q86WS3 158 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 CDKL3Q8IVW4 592 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 CARFQ8N187 725 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 CISD2Q8N5K1 135 aaKnown RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 RNF10Q8N5U6 811 aaKnown RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 TMEM102Q8N9M5 508 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-204ENST00000554116 IPMKQ8NFU5 416 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 OR4E2Q8NGC2 313 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 OR2L2Q8NH16 312 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 CPT1BQ92523 772 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 C12orf66Q96MD2 445 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 PITPNM3Q9BZ71 974 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 TRABDQ9H4I3 376 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 SLAMF7Q9NQ25 335 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 C1GALT1Q9NS00 363 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 GPR83Q9NYM4 423 aa11.21□□□□□ -0.61
TUBB3-204ENST00000554116 MAP1AP78559 2803 aaPredicted RBP11.21□□□□□ -0.62
TUBB3-204ENST00000554116 NUP210LQ5VU65 1888 aa11.21□□□□□ -0.62
TUBB3-204ENST00000554116 F8P00451 2351 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ANXA9O76027 345 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 STK10O94804 968 aaKnown RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 PVRP15151 417 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 HLA-DPA1P20036 260 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 PRDX3P30048 256 aaKnown RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 GABRA4P48169 554 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 LMAN1P49257 510 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ARL4DP49703 201 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 GEMP55040 296 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 PDE1BQ01064 536 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 OLIG2Q13516 323 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 PRPSAP1Q14558 356 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 NCF4Q15080 339 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ANKRD20A2Q5SQ80 823 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ANKRD20A1Q5TYW2 823 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ANKRD20A3Q5VUR7 823 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ITPRIPL1Q6GPH6 555 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 CDHR3Q6ZTQ4 885 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 MED25Q71SY5 747 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 HPS6Q86YV9 775 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 SLC34A3Q8N130 599 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 TTC13Q8NBP0 860 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ZNF398Q8TD17 642 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 HES6Q96HZ4 224 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 TTC25Q96NG3 672 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 TRAPPC9Q96Q05 1148 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 FSD1LQ9BXM9 530 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 KLHL25Q9H0H3 589 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 GBA3Q9H227 469 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ZNF552Q9H707 407 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ACTR5Q9H9F9 607 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 FAM60AQ9NP50 221 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 FAM8A1Q9UBU6 413 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ACSL5Q9ULC5 683 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 G3BP2Q9UN86 482 aaKnown RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 AAR2Q9Y312 384 aaKnown RBP11.2□□□□□ -0.62
TUBB3-204ENST00000554116 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 ARL5AQ9Y689 179 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 CAPN6Q9Y6Q1 641 aa11.2□□□□□ -0.62
TUBB3-204ENST00000554116 MTORP42345 2549 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 CCDC168Q8NDH2 2452 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 TMEM150CB9EJG8 249 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 BTN3A1O00481 513 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 ZNF749O43361 778 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 AGTP01019 485 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 POLBP06746 335 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 KLK3P07288 261 aaPredicted RBP11.19□□□□□ -0.62
TUBB3-204ENST00000554116 TPBGLP0DKB5 382 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 CBSLP0DN79 551 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 PRF1P14222 555 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 CBSP35520 551 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 ZIC1Q15915 447 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 BCL7AQ4VC05 210 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 TMTC4Q5T4D3 741 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 IGFL3Q6UXB1 125 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 GLT6D1Q7Z4J2 308 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 CUZD1Q86UP6 607 aa11.19□□□□□ -0.62
TUBB3-204ENST00000554116 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms