RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 METTL2BQ6P1Q9 378 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SBSNQ6UWP8 590 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ZYG11AQ6WRX3 759 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 NAPRTQ6XQN6 538 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 CDHR3Q6ZTQ4 885 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 VRK3Q8IV63 474 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TRIM48Q8IWZ4 208 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 PDPRQ8NCN5 879 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 OR5K2Q8NHB8 316 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 RAB3IL1Q8TBN0 382 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 LMX1AQ8TE12 382 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ZFPM2Q8WW38 1151 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TFGQ92734 400 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 RAD51AP1Q96B01 352 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 PTERQ96BW5 349 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 RMDN2Q96LZ7 410 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 C12orf66Q96MD2 445 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 ATOH8Q96SQ7 321 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TMEM74BQ9NUR3 256 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 INTS9Q9NV88 658 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SPATA7Q9P0W8 599 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TAAR2Q9P1P5 351 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 TSR3Q9UJK0 312 aaKnown RBP14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 SDK1Q7Z5N4 2213 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 CACNA1HO95180 2353 aa14.16□□□□□ -0.14
SHMT2-210ENST00000553950 CDC7O00311 574 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 FFAR2O15552 330 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 FOXD2O60548 495 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 LRP3O75074 770 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 TOP3BO95985 862 aaKnown RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 GFAPP14136 432 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 CPA3P15088 417 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 EPHA8P29322 1005 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 PDHA2P29803 388 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 ETV4P43268 484 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 PGGT1BP53609 377 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 TGFBIQ15582 683 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 OR4D1Q15615 310 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 PPP1R3AQ16821 1122 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 TUBB8Q3ZCM7 444 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 CYHR1Q6ZMK1 362 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 RASGRP3Q8IV61 690 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 FBXO39Q8N4B4 442 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 LILRA3Q8N6C8 439 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 CXorf40BQ96DE9 158 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 EGFL8Q99944 293 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 DUSP23Q9BVJ7 150 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 IMP3Q9NV31 184 aaKnown RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 EVA1BQ9NVM1 165 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 ARL15Q9NXU5 204 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 FAM53CQ9NYF3 392 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 CD274Q9NZQ7 290 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 SLC17A7Q9P2U7 560 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 TBC1D29Q9UFV1 150 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 KLF15Q9UIH9 416 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 EMCNQ9ULC0 261 aa14.15□□□□□ -0.14
SHMT2-210ENST00000553950 PNMA8BQ9ULN7 279 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 TNPO3Q9Y5L0 923 aaKnown RBP14.15□□□□□ -0.14
SHMT2-210ENST00000553950 A0A1B0GTQ1 180 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 A6NCN8 305 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ARHGEF33A8MVX0 844 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 STX16-NPEPL1H3BU86 382 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 MYO1CO00159 1063 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ARHGAP33O14559 1287 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 STX16O14662 325 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 SNUPNO95149 360 aaKnown RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 C1orf105O95561 183 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 DHRS4L1P0CG22 281 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 NEFHP12036 1026 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 CHN1P15882 459 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 AK4P27144 223 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 RPL10P27635 214 aaKnown RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 SERPINB4P48594 390 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 RPIAP49247 311 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ATXN3P54252 364 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ALDH18A1P54886 795 aaKnown RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 IRX4P78413 519 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ABRQ12979 859 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ARHGAP19Q14CB8 494 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ZNF542PQ5EBM4 170 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 LIPMQ5VYY2 423 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 SULT1C3Q6IMI6 304 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 XKR5Q6UX68 686 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 SLC9B2Q86UD5 537 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 NRROSQ86YC3 692 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 SPATA6LQ8N4H0 392 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 PRSS33Q8NF86 280 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 CFAP61Q8NHU2 1237 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 PPP1R14CQ8TAE6 165 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 DENND1AQ8TEH3 1009 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 EXT2Q93063 718 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 TCEAL2Q9H3H9 227 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 ZNF358Q9NW07 568 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 NCKIPSDQ9NZQ3 722 aa14.14□□□□□ -0.15
SHMT2-210ENST00000553950 CPSF2Q9P2I0 782 aaKnown RBP14.14□□□□□ -0.15
SHMT2-210ENST00000553950 PSMD13Q9UNM6 376 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms