RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GGT1P19440 569 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 BMP8BP34820 402 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CAPGP40121 348 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CASP2P42575 452 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 RPS9P46781 194 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 KRT6CP48668 564 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HNMTP50135 292 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HTR6P50406 440 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CDK9P50750 372 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HNRNPFP52597 415 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF33BQ06732 778 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 EPS8Q12929 822 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 RFTN2Q52LD8 501 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 FAM219BQ5XKK7 198 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 TTC33Q6PID6 262 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SLC2A7Q6PXP3 512 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SCIMPQ6UWF3 145 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 LRRC70Q7Z2Q7 622 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 APCDD1Q8J025 514 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 DHRSXQ8N5I4 330 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 WFDC5Q8TCV5 224 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 USP7Q93009 1102 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 GFM2Q969S9 779 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 BIRC7Q96CA5 298 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 NMD3Q96D46 503 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HIC2Q96JB3 615 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF641Q96N77 438 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 MCCC1Q96RQ3 725 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CEP44Q9C0F1 390 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF334Q9HCZ1 680 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HS3ST2Q9Y278 367 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 POLR3HQ9Y535 204 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CEPT1Q9Y6K0 416 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
SHMT2-205ENST00000553474 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SERTM1A2A2V5 107 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 K7ERQ8 282 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 KPNA5O15131 536 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 CLOCKO15516 846 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SMAD6O43541 496 aaKnown RBP12.65□□□□□ -0.38
SHMT2-205ENST00000553474 STK16O75716 305 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 TRIM16O95361 564 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 HPRP00739 348 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 C8GP07360 202 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
SHMT2-205ENST00000553474 MTHFD1P11586 935 aaKnown RBP12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SLC2A4P14672 509 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 PRPH2P23942 346 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 HRH2P25021 359 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 LMAN2Q12907 356 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SP140Q13342 867 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 MAPKAPK3Q16644 382 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 IMPG1Q17R60 797 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SPRED2Q7Z698 418 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 MPP4Q96JB8 637 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 TMEM74Q96NL1 305 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 COPS8Q99627 209 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 C17orf80Q9BSJ5 609 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 BOCQ9BWV1 1114 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SLC32A1Q9H598 525 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 C1orf109Q9NX04 203 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 ELOVL2Q9NXB9 296 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 SLAMF8Q9P0V8 285 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 YBX2Q9Y2T7 364 aaKnown RBP12.65□□□□□ -0.38
SHMT2-205ENST00000553474 TMED5Q9Y3A6 229 aa12.65□□□□□ -0.38
SHMT2-205ENST00000553474 MYO9BQ13459 2157 aa12.65□□□□□ -0.39
SHMT2-205ENST00000553474 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 SLC16A5O15375 505 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 GPR39O43194 453 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ZNF821O75541 412 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CLDN9O95484 217 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 GUCA1CO95843 209 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CKMP06732 381 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 OR56A5P0C7T3 313 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ETS2P15036 469 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 IL1RNP18510 177 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CTNNB1P35222 781 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 RPL38P63173 70 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 YBX1P67809 324 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ZXDBP98169 803 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CHRNB3Q05901 458 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PTPRRQ15256 657 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 CHRNA6Q15825 494 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PHKG1Q16816 387 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 USP51Q70EK9 711 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ERI1Q8IV48 349 aaKnown RBP12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ITFG1Q8TB96 612 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 GTF2H4Q92759 462 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 ASIC4Q96FT7 647 aa12.64□□□□□ -0.39
SHMT2-205ENST00000553474 PBX4Q9BYU1 374 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms