RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PHLDB2Q86SQ0 1253 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PAQR7Q86WK9 346 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PHC2Q8IXK0 858 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 GPR135Q8IZ08 494 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PELI3Q8N2H9 469 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 C3orf20Q8ND61 904 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 WFDC11Q8NEX6 87 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SNX21Q969T3 373 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ECHDC3Q96DC8 303 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SCRN2Q96FV2 425 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 THOC3Q96J01 351 aaKnown RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 TAAR6Q96RI8 345 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 MAP3K3Q99759 626 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 AP1M1Q9BXS5 423 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 CATSPERBQ9H7T0 1116 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 KLC4Q9NSK0 619 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PCMTD2Q9NV79 361 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 HRASLS2Q9NWW9 162 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 SAMD15Q9P1V8 674 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 IFT80Q9P2H3 777 aaPredicted RBP5.01□□□□□ -1.61
CKAP4-203ENST00000553039 B4GALT6Q9UBX8 382 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 TAGLN3Q9UI15 199 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 TINAGQ9UJW2 476 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 KCNK6Q9Y257 313 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PLEKHA6Q9Y2H5 1048 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF835Q9Y2P0 537 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 AP1M2Q9Y6Q5 423 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 DCHS2Q6V1P9 2916 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 PIKFYVEQ9Y2I7 2098 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 AKAP6Q13023 2319 aa5.01□□□□□ -1.61
CKAP4-203ENST00000553039 FAM237BA0A1B0GVD1 139 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 TRIM49BA6NDI0 452 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 FAM187AA6NFU0 413 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 PDZK1P1A8MUH7 402 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 GPR89AB7ZAQ6 455 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 E7EQ34 232 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 PMM2O15305 246 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 NUAK1O60285 661 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 KCNJ13O60928 360 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 TSPAN12O95859 305 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 RAF1P04049 648 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 GPR89BP0CG08 455 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 RBP3P10745 1247 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 PIM1P11309 404 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 ABOP16442 354 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 VCLP18206 1134 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 MMP11P24347 488 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 MST1P26927 711 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 HALP42357 657 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 PREPP48147 710 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 AP1S1P61966 158 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 NKX6-1P78426 367 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 GCNT1Q02742 428 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 KLF1Q13351 362 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 RFTN1Q14699 578 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 KRT72Q14CN4 511 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 STK38Q15208 465 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 SF1Q15637 639 aaKnown RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 CNGA3Q16281 694 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 PTCHD3Q3KNS1 767 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 DCAF17Q5H9S7 520 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 EXOSC6Q5RKV6 272 aaKnown RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 FAM198BQ6UWH4 519 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 WASH2PQ6VEQ5 465 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 NAPRTQ6XQN6 538 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 C16orf47Q6ZP98 133 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 CHSY3Q70JA7 882 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 RRAGAQ7L523 313 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 HSD11B1LQ7Z5J1 315 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 NLRP14Q86W24 1093 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 ZSWIM9Q86XI8 627 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 SPNS2Q8IVW8 549 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 TTC30BQ8N4P2 665 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 NETO2Q8NC67 525 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 KIAA0895Q8NCT3 520 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 CCDC110Q8TBZ0 833 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 DENND1AQ8TEH3 1009 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 ZFPM2Q8WW38 1151 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 RSC1A1Q92681 617 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 N4BP2L2Q92802 583 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 TBC1D31Q96DN5 1066 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 COX14Q96I36 57 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 FAM81BQ96LP2 452 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 RNF32Q9H0A6 362 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 ABCG8Q9H221 673 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 CARD9Q9H257 536 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 OSGEPL1Q9H4B0 414 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 EMC7Q9NPA0 242 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 SOHLH2Q9NX45 425 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF624Q9P2J8 865 aaPredicted RBP5□□□□□ -1.61
CKAP4-203ENST00000553039 LHX3Q9UBR4 397 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 INTUQ9ULD6 942 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 CNTN6Q9UQ52 1028 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 SIK3Q9Y2K2 1263 aa5□□□□□ -1.61
CKAP4-203ENST00000553039 CHD5Q8TDI0 1954 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 C17orf113A0A1B0GUU1 675 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 USP27XA6NNY8 438 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 WASH4PA8MWX3 477 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 TMEM150CB9EJG8 249 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms