RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 MIA3Q5JRA6 1907 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 LOC285095A0A1B0GVY8 99 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 CLDN24A6NM45 220 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 CENPXA8MT69 81 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 FXYD1O00168 92 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 SOD2P04179 222 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 ATXN1LP0C7T5 689 aaKnown RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 CSF2RAP15509 400 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 ACVR2AP27037 513 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 PPM1AP35813 382 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 NUDT1P36639 197 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC26A3P40879 764 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 NR4A2P43354 598 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 TUFMP49411 452 aaKnown RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 GSK3BP49841 420 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 IST1P53990 364 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 CXCR4P61073 352 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 BNC1Q01954 994 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 ZNF460Q14592 562 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 SIRPB2Q5JXA9 342 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 SPOUT1Q5T280 376 aaKnown RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 TPGS2Q68CL5 300 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 BPHLQ86WA6 291 aaPredicted RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 HORMAD1Q86X24 394 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 PLD3Q8IV08 490 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 TRIM43Q96BQ3 446 aaPredicted RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 NXNL1Q96CM4 212 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 TSPAN17Q96FV3 270 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 TMEM169Q96HH4 297 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 NSMCE2Q96MF7 247 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 ZNF300Q96RE9 604 aaPredicted RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 VN1R3Q9BXE9 311 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 PDFQ9HBH1 243 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 IL23AQ9NPF7 189 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 UXTQ9UBK9 157 aaPredicted RBP10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 DNMT3LQ9UJW3 386 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 OSGIN1Q9UJX0 560 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 C3orf18Q9UK00 162 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 MAFFQ9ULX9 164 aa10.84□□□□□ -0.67
TUBA1C-209ENST00000552448 PNMA8CA0A1B0GUJ8 204 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 A0A1W2PP18 115 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 F5H5T6 163 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 MUSKO15146 869 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 B4GAT1O43505 415 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 ACSL4O60488 711 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 GJB3O75712 270 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 ABCB1P08183 1280 aaPredicted RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 FGF4P08620 206 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 HTR1AP08908 422 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 PRKCAP17252 672 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 RPL17P18621 184 aaKnown RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 HDCP19113 662 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 MZF1P28698 734 aaPredicted RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SLC6A4P31645 630 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 OR1D2P34982 312 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 ATP5C1P36542 298 aaKnown RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CREMQ03060 361 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 LIPEQ05469 1076 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 PRKCDQ05655 676 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 FCHO2Q0JRZ9 810 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 ADPRMQ3LIE5 342 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 PITRM1Q5JRX3 1037 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CCNJQ5T5M9 372 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SPATA19Q7Z5L4 167 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CCDC103Q8IW40 242 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SLC39A11Q8N1S5 342 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CFAP52Q8N1V2 620 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 FAM110BQ8TC76 370 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 FBLIM1Q8WUP2 373 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 FAR1Q8WVX9 515 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 BIRC7Q96CA5 298 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 L3HYPDHQ96EM0 354 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 OMDQ99983 421 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SEMA3CQ99985 751 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SLC39A3Q9BRY0 314 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 UGT2B28Q9BY64 529 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SLIRPQ9GZT3 109 aaKnown RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 TOR3AQ9H497 397 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 SDR39U1Q9NRG7 319 aaPredicted RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 STMN3Q9NZ72 180 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 MKLN1Q9UL63 735 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 PCDHB3Q9Y5E6 796 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 PCDHGA8Q9Y5G5 932 aa10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 KIAA0100Q14667 2235 aaKnown RBP10.83□□□□□ -0.68
TUBA1C-209ENST00000552448 CHD5Q8TDI0 1954 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 AGAP5A6NIR3 686 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 G3V2T6 193 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 H3BNC9 293 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 SLC1A7O00341 560 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 SLC7A4O43246 635 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 LDB2O43679 373 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 FKBP9O95302 570 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 GJB5O95377 273 aa10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 HOXD9P28356 352 aaPredicted RBP10.82□□□□□ -0.68
TUBA1C-209ENST00000552448 PKLRP30613 574 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms