RNA–Protein interactions for RNA: ENST00000552213.1

CHPT1-207, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-207ENST00000552213 CBSLP0DN79 551 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 ENO3P13929 434 aaPredicted RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 MPSTP25325 297 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 CSF2RBP32927 897 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 CBSP35520 551 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 RGS4P49798 205 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 SQSTM1Q13501 440 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 NAB1Q13506 487 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 KLHL38Q2WGJ6 581 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 SNAP47Q5SQN1 464 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 TMEM71Q6P5X7 295 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 WDR74Q6RFH5 385 aaPredicted RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 OOSP2Q86WS3 158 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 DCUN1D3Q8IWE4 304 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 CPNE9Q8IYJ1 553 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 EIF1ADQ8N9N8 165 aaKnown RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 OR4D9Q8NGE8 314 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 OR52E1Q8NGJ3 308 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 OR5K2Q8NHB8 316 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 RSC1A1Q92681 617 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 MRRFQ96E11 262 aaKnown RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 VPS39Q96JC1 886 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 TGM7Q96PF1 710 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 CYTH2Q99418 400 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 HRASLS2Q9NWW9 162 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 KLHL3Q9UH77 587 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 WASF3Q9UPY6 502 aa12.78□□□□□ -0.36
CHPT1-207ENST00000552213 RUVBL2Q9Y230 463 aaKnown RBP12.78□□□□□ -0.36
CHPT1-207ENST00000552213 AGRPO00253 132 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 FAM153BP0C7A2 387 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 CAPZBP47756 277 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 PMS2P54278 862 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 CFHR1Q03591 330 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 PRKAA1Q13131 559 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 GBX1Q14549 363 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 EFTUD2Q15029 972 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 UAP1Q16222 522 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 GRTP1Q5TC63 336 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 LRRC8EQ6NSJ5 796 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 IRGCQ6NXR0 463 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 PAQR3Q6TCH7 311 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 TRMT10CQ7L0Y3 403 aaKnown RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 AMIGO1Q86WK6 493 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 UHMK1Q8TAS1 419 aaKnown RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 MAGEC3Q8TD91 643 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 SEMA6CQ9H3T2 930 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 TFB2MQ9H5Q4 396 aaKnown RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 XKR8Q9H6D3 395 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 ANKZF1Q9H8Y5 726 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 OGFRQ9NZT2 677 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 AKAP7Q9P0M2 348 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 SLC39A10Q9ULF5 831 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 PLAGL1Q9UM63 463 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 MSRB2Q9Y3D2 182 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 ENTPD2Q9Y5L3 495 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 NFS1Q9Y697 457 aa12.77□□□□□ -0.37
CHPT1-207ENST00000552213 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.37
CHPT1-207ENST00000552213 ZFC3H1O60293 1989 aaKnown RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 ASXL3Q9C0F0 2248 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 A0A087WUV0 522 aaPredicted RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 GSAPA4D1B5 854 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 OR5K3A6NET4 321 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 A8MU76 341 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 EIF3FO00303 357 aaPredicted RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 RASSF9O75901 435 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 FAM155BO75949 473 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 C1orf105O95561 183 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 C1QAP02745 245 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 MPC1LP0DKB6 136 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 POLR2CP19387 275 aaPredicted RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 CD9P21926 228 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 FDXRP22570 491 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 MAP4P27816 1152 aaKnown RBP12.76□□□□□ -0.37
CHPT1-207ENST00000552213 TNFRSF8P28908 595 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 CCKBRP32239 447 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 SHMT2P34897 504 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 CCNFP41002 786 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 BDKRB1P46663 353 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 PDX1P52945 283 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 LIMK2P53671 638 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 GFERP55789 205 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 IL2P60568 153 aa12.76□□□□□ -0.37
CHPT1-207ENST00000552213 SHC2P98077 582 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms