RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MOCOSQ96EN8 888 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 BARD1Q99728 777 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 ATP13A2Q9NQ11 1180 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 IFT80Q9P2H3 777 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 RSPH14Q9UHP6 348 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 FKBPLQ9UIM3 349 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 TRHDEQ9UKU6 1024 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 ARL5AQ9Y689 179 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 NUP210LQ5VU65 1888 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 OTOGQ6ZRI0 2925 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 PCM1Q15154 2024 aa13.73□□□□□ -0.21
CHMP1A-210ENST00000551981 C5orf60A6NFR6 353 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 HNRNPRO43390 633 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 SGTAO43765 313 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CST8O60676 142 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CBSLP0DN79 551 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 HNRNPH3P31942 346 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CBSP35520 551 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CDKN2BP42772 138 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 SLC1A1P43005 524 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CD151P48509 253 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CRB2Q5IJ48 1285 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 RHBDD2Q6NTF9 364 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 SPESP1Q6UW49 350 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 SPOCD1Q6ZMY3 1216 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 ZC3H18Q86VM9 953 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 NXPE1Q8N323 547 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 C19orf47Q8N9M1 422 aaKnown RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 COG1Q8WTW3 980 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 INPP5DQ92835 1189 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 PTERQ96BW5 349 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 COPS8Q99627 209 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 WDR77Q9BQA1 342 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 OR52A5Q9H2C5 316 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 COG4Q9H9E3 785 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 ACTR10Q9NZ32 417 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 SRPK3Q9UPE1 567 aa13.72□□□□□ -0.21
CHMP1A-210ENST00000551981 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 LRRTM2O43300 516 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 SPOPO43791 374 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 AKR1B10O60218 316 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ANXA9O76027 345 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 CRTAMO95727 393 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 AGTP01019 485 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ATP1B2P14415 290 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ITGALP20701 1170 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ITGA3P26006 1051 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 GEMP55040 296 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 AIMP2Q13155 320 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 RPA4Q13156 261 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 IRAK1BP1Q5VVH5 260 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 KAZNQ674X7 775 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 PPP1R32Q7Z5V6 425 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ADGRF3Q8IZF5 1079 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 MARVELD3Q96A59 401 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 GBP5Q96PP8 586 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 QKIQ96PU8 341 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 HGH1Q9BTY7 390 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 FICDQ9BVA6 458 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 XKR8Q9H6D3 395 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ENTPD4Q9Y227 616 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 NTNG1Q9Y2I2 539 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 MDC1Q14676 2089 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 ANKRD12Q6UB98 2062 aa13.71□□□□□ -0.21
CHMP1A-210ENST00000551981 CROCCQ5TZA2 2017 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 AGAP14A8MT82 685 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 HACD1B0YJ81 288 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 AGPSO00116 658 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 XIAPP98170 497 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 PRKG2Q13237 762 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 BOP1Q14137 746 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 SLC9A5Q14940 896 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 TAZQ16635 292 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 ASTE1Q2TB18 679 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 ITPRIPL1Q6GPH6 555 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 SNX20Q7Z614 316 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 PPP4R1Q8TF05 950 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 TFGQ92734 400 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 NACC2Q96BF6 587 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 CHRNA10Q9GZZ6 450 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 SPRTNQ9H040 489 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 RUBCNLQ9H714 662 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 ZNHIT6Q9NWK9 470 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
CHMP1A-210ENST00000551981 ARHGAP10A1A4S6 786 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
CHMP1A-210ENST00000551981 TPM3P06753 285 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms