RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 ARSEP51690 589 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 LMO4P61968 165 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 CX3CL1P78423 397 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 TMF1P82094 1093 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 CXCL9Q07325 125 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 SGSM1Q2NKQ1 1148 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 RSRC2Q7L4I2 434 aaKnown RBP4.05□□□□□ -1.76
GPN3-209ENST00000551079 MARVELD2Q8N4S9 558 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 BMPERQ8N8U9 685 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 AGAP3Q96P47 875 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 IWS1Q96ST2 819 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 C16orf70Q9BSU1 422 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 FGFBP2Q9BYJ0 223 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 PPIL3Q9H2H8 161 aaKnown RBP4.05□□□□□ -1.76
GPN3-209ENST00000551079 ARRDC1-AS1Q9H2J1 176 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 RHCGQ9UBD6 479 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 ZDHHC2Q9UIJ5 367 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 HACL1Q9UJ83 578 aa4.05□□□□□ -1.76
GPN3-209ENST00000551079 E9PQ18 207 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 GAPDHSO14556 408 aaPredicted RBP4.04□□□□□ -1.76
GPN3-209ENST00000551079 AP3D1O14617 1153 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 CA4P22748 312 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 PSMB10P40306 273 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 HADHAP40939 763 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 PDX1P52945 283 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 IRX6P78412 446 aaPredicted RBP4.04□□□□□ -1.76
GPN3-209ENST00000551079 NR1D2Q14995 579 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 TMCO3Q6UWJ1 677 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 HAUS6Q7Z4H7 955 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 PIGZQ86VD9 579 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 FAM114A1Q8IWE2 563 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 RAB42Q8N4Z0 105 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 MOSPD2Q8NHP6 518 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 OLIG1Q8TAK6 271 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 DYRK2Q92630 601 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 C18orf12Q96KH6 178 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 NEK1Q96PY6 1258 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 SPATC1LQ9H0A9 340 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 RNF186Q9NXI6 227 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
GPN3-209ENST00000551079 ASIC3Q9UHC3 531 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 GRIP1Q9Y3R0 1128 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 RIPK3Q9Y572 518 aa4.04□□□□□ -1.76
GPN3-209ENST00000551079 VILLO15195 856 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 PTP4A3O75365 173 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 KHDRBS3O75525 346 aaKnown RBP4.03□□□□□ -1.76
GPN3-209ENST00000551079 BAIAP3O94812 1187 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 TRIM49P0CI25 452 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 TRIM49CP0CI26 452 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 TNFAIP3P21580 790 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 HERV-K104P61576 105 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 SIRPAP78324 504 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 CDK3Q00526 305 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 IRF3Q14653 427 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 XKR6Q5GH73 641 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 FAM180BQ6P0A1 224 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 MAATS1Q7Z4T9 603 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 LDB1Q86U70 411 aaPredicted RBP4.03□□□□□ -1.76
GPN3-209ENST00000551079 MAPKAPK5-AS1Q8N8E1 139 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 KBTBD8Q8NFY9 601 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 OR4C3Q8NH37 302 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 FAM222BQ8WU58 562 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 ZNRF4Q8WWF5 429 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 BTBD10Q9BSF8 475 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 DCTN5Q9BTE1 182 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 FUCA2Q9BTY2 467 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 LMF2Q9BU23 707 aaKnown RBP4.03□□□□□ -1.76
GPN3-209ENST00000551079 CLEC7AQ9BXN2 247 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 SYNCQ9H7C4 482 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 SDR39U1Q9NRG7 319 aaPredicted RBP4.03□□□□□ -1.76
GPN3-209ENST00000551079 ZNF148Q9UQR1 794 aa4.03□□□□□ -1.76
GPN3-209ENST00000551079 HYKKA2RU49 373 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 B4DLN1 442 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 PRAMEF11O60813 436 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 RNASEH1O60930 286 aaKnown RBP4.02□□□□□ -1.77
GPN3-209ENST00000551079 CREG1O75629 220 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 NKX2-1P43699 371 aaPredicted RBP4.02□□□□□ -1.77
GPN3-209ENST00000551079 SLC15A1P46059 708 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 MRPL12P52815 198 aaKnown RBP4.02□□□□□ -1.77
GPN3-209ENST00000551079 PNLIPRP2P54317 469 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 DSCR10P59022 87 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 KRTAP10-3P60369 221 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 DMPKQ09013 629 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 RAB41Q5JT25 222 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 BSPRYQ5W0U4 402 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 COMMD2Q86X83 199 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 NIPA2Q8N8Q9 360 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 TRIML1Q8N9V2 468 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 FNDC11Q9BVV2 318 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 MAK16Q9BXY0 300 aaKnown RBP4.02□□□□□ -1.77
GPN3-209ENST00000551079 ARHGEF38Q9NXL2 777 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 PLAGL1Q9UM63 463 aa4.02□□□□□ -1.77
GPN3-209ENST00000551079 LAS1LQ9Y4W2 734 aaKnown RBP4.02□□□□□ -1.77
GPN3-209ENST00000551079 ITIH6Q6UXX5 1313 aa4.01□□□□□ -1.77
GPN3-209ENST00000551079 ZNF541Q9H0D2 1346 aa4.01□□□□□ -1.77
GPN3-209ENST00000551079 HEPACAM2A8MVW5 462 aa4.01□□□□□ -1.77
GPN3-209ENST00000551079 XRCC3O43542 346 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms